| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1586 |
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| Symbol | |
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| ID | 5322444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1682346 |
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| End bp | 1683488 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790530 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001327262 |
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| Protein GI | 150396795 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.139807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCAA TTGGCACCAG TTTGATTGTT GCCCTTTCGC TCATGGCTGC AATGCCGATA
CGAGCCGGCG CCCAAGATCC CGCGTCCTCT TTTGACGCGA GGGCGGCGCA GGCGGTCCGC
GACGACCCGC AAGCACAGTT CGTTCTCGGT TCGATGTACT ACAAGGGCAG CAGCGGGACA
CGGCGCGACC ATGCCATGGC AGCATACTGG TACCGCAAGG CCGCTGAACA GGGGCATGTC
AAGGCGCAAG TTAATCTGGG CGGCTTGTAT TTCGACGGCG AGGGCGTGGC GCAGGATTAT
GCCGAAGCGG CGCGGTGGTT TCGCAAGGCG GCCGAGGATG GCGCCGCCGC TTTGGCCGAG
CTCAATCTCG GCGTGATGTA CGAGCACGGA AGAGGTGTCG CGCCGGATCC GGCCGAGGCC
GCGCGCTGGT ACGGAAGGGC GGCCGAGCAT GGGGATGCGC AGGCGCAACA CCGACTTGGT
CTCATGTACT TCAAAGGCGA AGGAGTGAAA CGGGATCACG TGCAAGCAGC GCGCTGGTAT
CGCGCGGCGG CCGCGCAAGG CAACCCTTCC GCCCAGTTCC ATCTCGGAAG CATGTATTTG
CAGGGTCAGG GCGTGCCGAA GGAACCGTCA GAAGCGTTTC GTCTGTTCCG GGGCGCGGGC
GGGCTCGGGC ATGAAAACGC TCAGTACAAT CTGGGCTTGA TGTATCTGAA TGGCATCGGT
GTGCAAAAGG ATCTTGATGA ATCCGTGCGC TGGTTTCGCG CCGCGGCCGA ACAGAAATCG
GCGCTTGGTC AGTACAATCT CGCACTGATG TACGCGAACG GCACCGGTGT TGCCAAAAAT
TCAGAAGAGG CGGCTCGCTT GACGAGTCTC GCGGCCCATC AGGGATTGGC AATGGCGCAG
CACAATCTCG GCATCGCCTA TATCAGCGGT GCGGGCGTGG AAAAGGACTC TGCAGCGGCC
GTGCATTGGT TTCAGAAGGC GGCGCAGCAG GGTCATGCCA GGGCTCAGTT CAATCTGGCA
ATGATGTATG CACGGGGTGA GGGCGTGGCC AGGAACGATG CGCTCGCGTT CGAGTGGATG
CAGAAGGCGG CAAATCAGCT GCCGGAGGCG CGGCAGTACC TCGATCGCAC GCGCAAGGAA
TGA
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| Protein sequence | MKSIGTSLIV ALSLMAAMPI RAGAQDPASS FDARAAQAVR DDPQAQFVLG SMYYKGSSGT
RRDHAMAAYW YRKAAEQGHV KAQVNLGGLY FDGEGVAQDY AEAARWFRKA AEDGAAALAE
LNLGVMYEHG RGVAPDPAEA ARWYGRAAEH GDAQAQHRLG LMYFKGEGVK RDHVQAARWY
RAAAAQGNPS AQFHLGSMYL QGQGVPKEPS EAFRLFRGAG GLGHENAQYN LGLMYLNGIG
VQKDLDESVR WFRAAAEQKS ALGQYNLALM YANGTGVAKN SEEAARLTSL AAHQGLAMAQ
HNLGIAYISG AGVEKDSAAA VHWFQKAAQQ GHARAQFNLA MMYARGEGVA RNDALAFEWM
QKAANQLPEA RQYLDRTRKE
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