Gene Smed_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1583 
Symbol 
ID5322441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1680111 
End bp1681019 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content63% 
IMG OID640790527 
Producthypothetical protein 
Protein accessionYP_001327259 
Protein GI150396792 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0899842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTCGT CAGCCAACTT CCGCGGCATC GTCTTCATGT GCCTCGCGAT GATCGGGTTC 
GCCTGCAACG ACGCGCTGGT AAAATCGGTC ACCGGCGCCA TGAACACCGG TCAGATAATG
TTCATGCGCG GCTTGCTGAC GACGCTGATG GTTGTCGTCA TTGCATACCG TCTCGGTGCA
TTTCGGCCGA TACGGACCAT CCTCCGGCCA GCTATCCTGC TGCGCATCGC AATGGAGGCG
CTGGCATCGG TGACCTATAT CTCCGCACTC GGCCAGATTC CGCTCGCCAA CGCATCGGCG
ATCATGCAGG CGCTACCGCT GGCGGTGACG CTCGGTGCCG CGCTGTTTCT CGGCGAGCCC
GTCGGCTGGC GTCGGTGGGC GGCGATCGTG GTCGGCTTCG CCGGCGTCCT CATCGTGTTG
CGTCCTGGTC CTGAGGGTTT CACCGTGGCG GCCCTTACAG TCGTTGCCTG CGTCTTTTGC
ACCGCGACGC GCGATCTCTG CACGCGCCGT ATCGGCACCG ACGTGCCTTC GCTGTACATC
ACCGTGACGA CCTCATTCGT AACGACGCTG GTAGGCGCGG CCCTCATCGT GCCGCTCGGC
GGCTGGCAAC CAATGTCGGC GACGTCGCTC AGCCATATCG CCGGGGCCAG CGTGCTTCTG
ATGCTCGGCT ATCAGACGAT CGTGCTCGCG ATGCGCGAAG GCGAGATTTC GGTGATTGCC
CCATTTCGCT ATATGAGCCT TCTGTGGTCC GTCACGCTCG GGGTCGTCTT CTTCGCAGAG
ACACCGGACC GCTGGATGCT GGCGGGCGTC GCCATCATCA TCGGCTCGGG CCTTTATACT
TTCTACCGCG AGAGCAAGCG CGGCCGGCGA GCGGTCGCTC AGCGTGCACT CACCGGCCCT
CTGGAATAG
 
Protein sequence
MGSSANFRGI VFMCLAMIGF ACNDALVKSV TGAMNTGQIM FMRGLLTTLM VVVIAYRLGA 
FRPIRTILRP AILLRIAMEA LASVTYISAL GQIPLANASA IMQALPLAVT LGAALFLGEP
VGWRRWAAIV VGFAGVLIVL RPGPEGFTVA ALTVVACVFC TATRDLCTRR IGTDVPSLYI
TVTTSFVTTL VGAALIVPLG GWQPMSATSL SHIAGASVLL MLGYQTIVLA MREGEISVIA
PFRYMSLLWS VTLGVVFFAE TPDRWMLAGV AIIIGSGLYT FYRESKRGRR AVAQRALTGP
LE