Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1583 |
Symbol | |
ID | 5322441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1680111 |
End bp | 1681019 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640790527 |
Product | hypothetical protein |
Protein accession | YP_001327259 |
Protein GI | 150396792 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0899842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTCGT CAGCCAACTT CCGCGGCATC GTCTTCATGT GCCTCGCGAT GATCGGGTTC GCCTGCAACG ACGCGCTGGT AAAATCGGTC ACCGGCGCCA TGAACACCGG TCAGATAATG TTCATGCGCG GCTTGCTGAC GACGCTGATG GTTGTCGTCA TTGCATACCG TCTCGGTGCA TTTCGGCCGA TACGGACCAT CCTCCGGCCA GCTATCCTGC TGCGCATCGC AATGGAGGCG CTGGCATCGG TGACCTATAT CTCCGCACTC GGCCAGATTC CGCTCGCCAA CGCATCGGCG ATCATGCAGG CGCTACCGCT GGCGGTGACG CTCGGTGCCG CGCTGTTTCT CGGCGAGCCC GTCGGCTGGC GTCGGTGGGC GGCGATCGTG GTCGGCTTCG CCGGCGTCCT CATCGTGTTG CGTCCTGGTC CTGAGGGTTT CACCGTGGCG GCCCTTACAG TCGTTGCCTG CGTCTTTTGC ACCGCGACGC GCGATCTCTG CACGCGCCGT ATCGGCACCG ACGTGCCTTC GCTGTACATC ACCGTGACGA CCTCATTCGT AACGACGCTG GTAGGCGCGG CCCTCATCGT GCCGCTCGGC GGCTGGCAAC CAATGTCGGC GACGTCGCTC AGCCATATCG CCGGGGCCAG CGTGCTTCTG ATGCTCGGCT ATCAGACGAT CGTGCTCGCG ATGCGCGAAG GCGAGATTTC GGTGATTGCC CCATTTCGCT ATATGAGCCT TCTGTGGTCC GTCACGCTCG GGGTCGTCTT CTTCGCAGAG ACACCGGACC GCTGGATGCT GGCGGGCGTC GCCATCATCA TCGGCTCGGG CCTTTATACT TTCTACCGCG AGAGCAAGCG CGGCCGGCGA GCGGTCGCTC AGCGTGCACT CACCGGCCCT CTGGAATAG
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Protein sequence | MGSSANFRGI VFMCLAMIGF ACNDALVKSV TGAMNTGQIM FMRGLLTTLM VVVIAYRLGA FRPIRTILRP AILLRIAMEA LASVTYISAL GQIPLANASA IMQALPLAVT LGAALFLGEP VGWRRWAAIV VGFAGVLIVL RPGPEGFTVA ALTVVACVFC TATRDLCTRR IGTDVPSLYI TVTTSFVTTL VGAALIVPLG GWQPMSATSL SHIAGASVLL MLGYQTIVLA MREGEISVIA PFRYMSLLWS VTLGVVFFAE TPDRWMLAGV AIIIGSGLYT FYRESKRGRR AVAQRALTGP LE
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