Gene Smed_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1580 
Symbol 
ID5322438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1678289 
End bp1678663 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content62% 
IMG OID640790524 
Producthypothetical protein 
Protein accessionYP_001327256 
Protein GI150396789 
COG category[S] Function unknown 
COG ID[COG3536] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.253463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAT TCTGGCCGAC CGAACTGCGG GTATCAAAGG ATCGGCAACG CCTGTCCGTC 
AGCTTCGACG ATGGCGCTTC ATTCGACCTT TCCGCGGAAC TCCTGCGCGT CCTCTCGCCC
TCGGCCGAGG TGCAGGGGCA CGGTCCTGGT CAACGGCTCA CCGTCCCGGG AAAGCGCAAC
GTCCAGATCA TCTCGGTCCA ACCAACGGGG AACTATGCGG TGCGCATAGG CTTTGACGAT
ACGCACGACA CCGGCATTTT CACCTGGACC TATCTGCGTG AGCTCGGCGA GAGGGGCGGC
GAGCTTTTCA AGGCCTATGA GCAGGAGCTC GCTGAGAAGG GCATGTCGCG CGACAAGGCC
GAGAAGCCGC GCTGA
 
Protein sequence
MSEFWPTELR VSKDRQRLSV SFDDGASFDL SAELLRVLSP SAEVQGHGPG QRLTVPGKRN 
VQIISVQPTG NYAVRIGFDD THDTGIFTWT YLRELGERGG ELFKAYEQEL AEKGMSRDKA
EKPR