| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1574 |
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| Symbol | |
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| ID | 5322432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1671545 |
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| End bp | 1672228 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640790518 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_001327250 |
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| Protein GI | 150396783 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0357575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCTTGC CCCTAGTCGT CTTCGATCTC GACGGTACGC TCGTCGACAC AGCGCCCGAC
CTCGTCGCCA GCTTGAACCA TGCCGTGACG CAGGTTGGCC TCGAGCCAGT GACCTACGCG
GATCTCACGC ATCTGGTCGG CCACGGCGCA CGGGCGATGA TCGAAAGGAC TTTCGCACTC
CGCGGCAGGA CGATCGCCGA AGACGAACTG ACCCGGCAGA TGAACGTGTT CGTCGAGTTC
TATCATGGAT CGATGCCGGG CGAATCCCTG CCCTACCCCG GTCTCGTCGA GGCCCTCGAC
CGCCTGCAGG ATGCGGGCAT GAAACTTGCC GTCTGCACCA ACAAGCCGGA AATGCTGGCA
AAACGCCTTC TGGAGGGGCT TGGACTCCTC GACCGCTTTG CGGCGATATC CGGTGGCGAT
ACCTTCTCCG TTCGCAAACC GCATGCCGAC CACCTGTTGT CGACGGTCGC GAATGCCCGT
GGCCTGCCCG AGCGGGCGGT GATGGTGGGC GACAGCCTCA ACGACATCCT GGTCGCCCGA
AATGCCGCAG TTCCTTCGAT CGTCGTGCCG TTCGGCTATT CCGACGTGCC GATCGAAAGC
CTCCTTCCCG ACCGCATCAT CGGTCATTTC GACGAACTGA CGCCGGATCT GGTCGAGGCA
GTGCTCTCGC GCAAGCCGAA ATGA
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| Protein sequence | MSLPLVVFDL DGTLVDTAPD LVASLNHAVT QVGLEPVTYA DLTHLVGHGA RAMIERTFAL
RGRTIAEDEL TRQMNVFVEF YHGSMPGESL PYPGLVEALD RLQDAGMKLA VCTNKPEMLA
KRLLEGLGLL DRFAAISGGD TFSVRKPHAD HLLSTVANAR GLPERAVMVG DSLNDILVAR
NAAVPSIVVP FGYSDVPIES LLPDRIIGHF DELTPDLVEA VLSRKPK
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