| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1570 |
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| Symbol | |
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| ID | 5322428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1666800 |
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| End bp | 1668173 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790514 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_001327246 |
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| Protein GI | 150396779 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.301132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.755317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAGA CTTGGACTCC GAACAGCTGG CGGCAAAAAC CCATTCAGCA GGTGCCGGAT
TATCCGGACC TCGCAGCGCT CGACAGCGTG GAAGCGCGTC TTGCCAAATA TCCGCCGCTT
GTCTTTGCAG GAGAGGCGCG CCGTCTGAAG AGTGCGCTTG CCAATGTCGC CGACGGCCGT
GGTTTTCTGC TGCAGGGGGG CGATTGCGCC GAGAGCTTTG CCGAACACGG CGCCGATACG
ATCCGGGACT TCTTCCGCGC CTTCCTGCAG ATGGCCGTCG TCCTGACCTT CGGGGCGCAG
CAACCGGTCG TCAAGGTCGG CCGTATTGCC GGCCAATTCG CCAAGCCGCG CTCCTCGGGT
ATCGAGAAGC AGGGTGACGT ATCGCTGCCG AGCTACCGCG GCGACATCAT CAACGGGATC
GAGTTCACGG AGGAGGCACG CGTGCCCAAT CCGGAGCGCC AGGTCATGGC CTATCGCCAG
TCCGCGGCTA CGCTCAACCT GCTTCGTGCC TTTGCCATGG GTGGTTACGC CAACCTGGAA
AACGTCCATC AATGGATGCT CGGTTTCGTC AAGGACAGCC CGCAGGCGGA GCGTTATCGC
AAGCTTGCCG ACCGGATCTC CGAGACGATG GATTTCATGA AGGCGATCGG CATTACCGCC
GAAAACCATC CGAGCCTGCG CGAAACGGAT TTCTTCACCA GCCACGAGGC GTTGCTGCTT
GGGTACGAGC AGGCGCTCAC GCGCGTCGAT TCCACCTCAG GCGACTGGTA CGCGACGTCG
GGCCATATGA TCTGGATCGG AGATCGCACG CGCCAGCCGG ATCATGCGCA TATCGAGTAT
TGCCGTGGCA TCAAGAATCC GCTCGGCCTG AAGTGCGGTC CGTCGCTGAC GGCGGACGGA
CTTCTCGAAC TTATCGACAT CCTCAATCCG GCGAACGAGG CGGGACGGCT TACGCTGATC
TGCCGCTTCG GGCACGACAA GGTCGCCGAG CATCTGCCGC GCCTCATCCG CGCCGTCGAG
CGGGAGGGCA AGAAGGTGGT GTGGTCCTGC GATCCGATGC ACGGCAACAC GATCACGCTC
AACAATTACA AGACCCGGCC GTTCGAGCGT ATCCTGTCGG AAGTCGAGAG CTTCTTTCAG
ATTCATCGCG CCGAGGGCTC GCATCCCGGC GGCATCCATA TCGAAATGAC CGGCAACGAC
GTGACGGAAT GCACCGGCGG TGCACGCGCG CTTTCCGGCG ACGACCTTGC CGACCGCTAC
CACACGCATT GCGATCCGCG CCTCAATGCC GATCAGGCAC TCGAGCTTGC CTTCCTGCTC
GCCGAGCGCA TGAAGGGCGG CCGCGACGAG AAGAAGATGG TGGTGAACGG CTGA
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| Protein sequence | MAQTWTPNSW RQKPIQQVPD YPDLAALDSV EARLAKYPPL VFAGEARRLK SALANVADGR
GFLLQGGDCA ESFAEHGADT IRDFFRAFLQ MAVVLTFGAQ QPVVKVGRIA GQFAKPRSSG
IEKQGDVSLP SYRGDIINGI EFTEEARVPN PERQVMAYRQ SAATLNLLRA FAMGGYANLE
NVHQWMLGFV KDSPQAERYR KLADRISETM DFMKAIGITA ENHPSLRETD FFTSHEALLL
GYEQALTRVD STSGDWYATS GHMIWIGDRT RQPDHAHIEY CRGIKNPLGL KCGPSLTADG
LLELIDILNP ANEAGRLTLI CRFGHDKVAE HLPRLIRAVE REGKKVVWSC DPMHGNTITL
NNYKTRPFER ILSEVESFFQ IHRAEGSHPG GIHIEMTGND VTECTGGARA LSGDDLADRY
HTHCDPRLNA DQALELAFLL AERMKGGRDE KKMVVNG
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