| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1566 |
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| Symbol | nadE |
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| ID | 5322424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1660932 |
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| End bp | 1662614 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640790510 |
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| Product | NAD synthetase |
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| Protein accession | YP_001327242 |
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| Protein GI | 150396775 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0171] NAD synthase
[COG0388] Predicted amidohydrolase |
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| TIGRFAM ID | [TIGR00552] NAD+ synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.175024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0652771 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCAC AGAAAGCCGC TCCCTCAACG CTACGGATCG CCGTAGCACA GCTCAATCCA
ACAGTCGGAG ACATTGCCGG CAATATGACA AAGGCGCGCG AGGCGCGGGC GGCGGCGGCG
CGCGAGGGCG CCGACCTGCT GCTCTTTACC GAGCTCTTCC TGTCCGGCTA CCCGCCCGAA
GACCTTGTTC TGAAGCCCGC CTTCCTGAGC GCTTGCGAAC AGGCCGTAGA GAAGCTCGCC
GCAGAGACGG CAGATGGTGG GCCGGGCATC GTTATCGGCT TCCCGAGACA GGCGGCCGCC
CTCCGGCACA ATTCCGTGGC GGTGCTCGAT GGCGGCAAGA TCATCGCCGT CCGCGACAAG
GTGGACTTGC CGAACTACGG CGAGTTTGAC GAGAAACGCG TCTTCGATGC GGGCGAAATG
CCCGGGCCGG TGAACTTCCG CGGCGTGCGC ATCGGTATAC CCGTATGCGA GGACATATGG
GGCGATCTCG GCGTTTGCGA GACCCTTGCG GAGAGTGGCG CAGAGATTCT TCTTTCACCG
AACGGCTCGC CCTATTATCG CGGCAAGCTG GACGTGCGTC ATCAGGTGGT CCTGAGGCAA
GTGATCGAAA CCGGGCTGCC GATGATCTAT GCCAACCAGC TCGGCGGTCA GGACGAACTG
GTTTTCGACG GCGCGAGCTT TGCCTTCAAC GCGGACAAGT CACTGGCCTT CCAGATGAGC
CAGTTCGAGG AGGCCGTCGC CGTATCCGAA TGGAGAAGGG GTGCGGATGG CTGGGTCTCC
GGCAACGGAT TGAAGTCACG CGTACCGGAA GGAGAGGAAG CGGATTATCG CGCCTGCATG
CTGGGCTTCC GGGATTACGT CAACAAGAAC GGTTTTCGTA ATGTTGTGCT TGGCCTTTCC
GGCGGGATCG ATTCGGCAAT CTGCACTGCA CTTGCGGTGG ATGCGTTGGG CGAGGAGCGG
GTCCGCACTG TCATGCTGCC ATACCGCTAC ACCTCGCGCG AGTCGTTGCA GGATGCCGAG
GCATGCGCCA GGGCCCTTGG CTGCCGCTAC GACATCGTTG CTATCGAGGA GCCCGTCGAG
GGCTTTCTCA GCGCGCTCTC CGATATGTTC GAGGGTACCG AAGCGGGCAT TACCGAGGAG
AACCTTCAGA GCCGCACGCG CGGGACGATC CTGATGGCGA TATCCAACAA GTTCGGCTCC
ATGGTGGTGA CGACGGGTAA CAAATCCGAG ATGTCGGTCG GCTACGCCAC GCTTTACGGG
GACATGAACG GCGGTTTCAA CCCGATCAAG GATCTGTACA AGATGCAGGT TTATGCGCTG
GCACGCTGGC GCAATGGCAC GGTGCCGCCG GGAGCGCTGG GGCCTTCGGG TGAAGTCATC
CCGCAGAACA TCATCGACAA GGCGCCGTCA GCCGAACTCC GTCCCGACCA GACGGACCAG
GACTCGCTGC CGCCTTATCC GGTGCTCGAC GACATTCTCG AATGCCTGGT CGAGAAGGAG
ATGAGCACGG AGGATGTCGT CGCACGGGGA CATGAGGAGG CGACGGTCCA CAGGATCGAG
CATCTGCTCT ACATTGCGGA ATACAAGCGT CGGCAATCGG CCCCAGGTGT GAAGATCACC
AGGAAGAACT TCGGCCGCGA TCGGCGCTAT CCCATTACCA ACCGGTTCCG CGACAGGGGA
TAA
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| Protein sequence | MTAQKAAPST LRIAVAQLNP TVGDIAGNMT KAREARAAAA REGADLLLFT ELFLSGYPPE
DLVLKPAFLS ACEQAVEKLA AETADGGPGI VIGFPRQAAA LRHNSVAVLD GGKIIAVRDK
VDLPNYGEFD EKRVFDAGEM PGPVNFRGVR IGIPVCEDIW GDLGVCETLA ESGAEILLSP
NGSPYYRGKL DVRHQVVLRQ VIETGLPMIY ANQLGGQDEL VFDGASFAFN ADKSLAFQMS
QFEEAVAVSE WRRGADGWVS GNGLKSRVPE GEEADYRACM LGFRDYVNKN GFRNVVLGLS
GGIDSAICTA LAVDALGEER VRTVMLPYRY TSRESLQDAE ACARALGCRY DIVAIEEPVE
GFLSALSDMF EGTEAGITEE NLQSRTRGTI LMAISNKFGS MVVTTGNKSE MSVGYATLYG
DMNGGFNPIK DLYKMQVYAL ARWRNGTVPP GALGPSGEVI PQNIIDKAPS AELRPDQTDQ
DSLPPYPVLD DILECLVEKE MSTEDVVARG HEEATVHRIE HLLYIAEYKR RQSAPGVKIT
RKNFGRDRRY PITNRFRDRG
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