| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1558 |
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| Symbol | |
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| ID | 5322416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1650759 |
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| End bp | 1653071 |
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| Gene Length | 2313 bp |
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| Protein Length | 770 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790503 |
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| Product | malic enzyme |
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| Protein accession | YP_001327235 |
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| Protein GI | 150396768 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0280] Phosphotransacetylase
[COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0734911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.266658 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGG GCGATAAAGC GAAATCCCAA GCGGTTCCCG CCAGCGGAGA TATCGATCAG
CAGGCACTCT TCTTTCATCG CTATCCTCGC CCCGGCAAAC TCGAGATCCA GCCGACAAAA
CCGCTCGGGA ACCAGCGCGA CCTGGCCCTC GCCTATTCTC CCGGTGTCGC CGCACCGTGC
CTCGCCATCA GGGACAACCC TGAAACTGCG GCCGATTTTA CCGCTCGCGC CAACCTCGTC
GCGGTGGTGT CCAACGGCAC AGCCGTTCTC GGGCTCGGCA ATATCGGCCC TCTCGCCTCC
AAGCCCGTCA TGGAAGGAAA GGCCGTTCTC TTCAAGAAGT TCGCAGGGAT CGACGTCTTC
GACATCGAGA TCGATGCGCC GACGGTCGAG CGGATGGTCG ACGTCATCTC CGCTCTGGAG
CCGACTTTCG GCGGCATCAA TCTCGAGGAC ATAAAGGCAC CCGAATGCTT CGAGGTGGAG
CGACGCCTGC GCGAGAAAAT GGAAATACCG GTTTTTCACG ATGACCAGCA CGGAACCGCG
ATCATCGTTG CGGCGGCCGT ACTGAACGGC CTGGAACTCG CCGGCAAGGA CATCGCCAAG
GCCAAGATCG TGGCTTCGGG TGCCGGAGCT GCGGCGCTGG CCTGTCTCAA CCTGCTCGTC
ACGCTTGGCG CCAGACGCGA AAACATCTGG GTCCATGATA TCGAGGGTCT GGTCTACCAG
GGGCGCGAGG TCCTGATGGA CGAATGGAAA GCGGTCTACG CGCAGGAAAG CGACCACCGC
GTTCTCGCCG ACAGCATCGC TGGCGCCGAC GTGTTTCTGG GCCTGTCGGC CGCAGGCGTT
CTCAAGCCCG AGCTGCTGGT TCAAATGGCT GAGAAGCCGC TGATCATGGC GCTCGCCAAT
CCGACGCCGG AGATCATGCC CGAGATGGCC CGTGCCGCGC GTCCCGACGC CATGATCTGC
ACCGGACGAT CGGACTTTCC CAACCAGGTC AACAATGTCC TCTGTTTCCC GCATATCTTT
CGCGGCGCTC TCGATTGCGG CGCACGTACC ATCAACGAAG AGATGAAGAT GGCGGCCGTG
CGCGCGATCG CCGGTCTTGC CCGCGAAGAA CCGTCGGACG TCGCCGCCCG CGCCTATTCC
GGCGAAACGC CGGTTTTCGG CCCCGATTAC CTGATCCCCT CGCCCTTCGA TCAGCGGCTG
ATCCTGCGCA TTGCGCCGGC CGTCGCGAGG GCTGCGGCCG AAAGCGGCGT CGCCACGCGC
CCGATCCAGG ATTTCGACGC CTATCTCGAC AATCTCAACC GGTTCGTCTT CCGCTCCGGC
TTCATCATGA AGCCCGTCTT CGCCGCAGCG AAGAATGCGT CGAAGAACCG CGTCATCTTC
GCCGAGGGCG AAGACGAGCG GGTCTTGCGC GCCGCCCAGG TGCTGCTGGA AGAAGGTACG
GCCAAGCCTA TCCTGATCGG CCGCCCGCAA ATCATCGAAA CCCGACTGCG GCGCTATGGC
CTCCGTATCC GCCCCGATAT CGACTTCGAG GTGGTCAATC CTGAAGGCGA CCCACGCTAT
CGCGACTATG TCGATGATTA TTTCGCCCTC GTTGGTCGGC TCGGCGTCAT TCCCGAGGCG
GCTCGCACGA TCGTACGCAC GAACACGACC GTGATCGGGG CGCTTGCAGT CAAACGCGGC
GAGGCCGACG CGCTGATCTG CGGCGTCGAA GGCCGCTACA GCAGGCATCT GCGCGATGTG
TCGCAGATCA TCGGCAAGCG TTCGGGCGTG CTCGATTTCT CGGCGCTCAG CCTTCTGATC
TCGCAGCGTG GCGCGACCTT CTTCACGGAT ACCTATGTGA GCTTCAGTCC GAGTGCGGAG
GAGATCGCTC AGACCACGGT GATGGCGGCA AACGAGATCC GCCGCTTCGG AATCACGCCG
CGCGCCGCTC TCGTCTCCCA TTCGAATTTC GGCTCACGCG ATTCCGAGAG TGCCTTCAAA
ATGCGCGCTG CTTTGCAGAT CGTGCGCGAG CTCGCGCCTG ATCTCGAGGT GGACGGGGAA
ATGCATGGCG ATTCCGCCAT TTCCGAGGGC CTGCGCCAAC GCGTGATGCC TGACAGTACA
CTGAACGGCG AGGCCAATCT GCTCGTTTTC CCCAATCTCG ACGCCGCCAA CATAACGCTT
GGTGTCGTCA AGACCATGAC GGACAGTCTG CATGTCGGCC CGATCCTTCT CGGCTCCGCA
CTTCCCGCGC ATATTCTGTC GCCATCAGTC ACGTCCCGCG GCGTCGTCAA CATGGCAGCT
CTGGCGGTCG TCGAATCAAG CTATCCCGTC TGA
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| Protein sequence | MNTGDKAKSQ AVPASGDIDQ QALFFHRYPR PGKLEIQPTK PLGNQRDLAL AYSPGVAAPC
LAIRDNPETA ADFTARANLV AVVSNGTAVL GLGNIGPLAS KPVMEGKAVL FKKFAGIDVF
DIEIDAPTVE RMVDVISALE PTFGGINLED IKAPECFEVE RRLREKMEIP VFHDDQHGTA
IIVAAAVLNG LELAGKDIAK AKIVASGAGA AALACLNLLV TLGARRENIW VHDIEGLVYQ
GREVLMDEWK AVYAQESDHR VLADSIAGAD VFLGLSAAGV LKPELLVQMA EKPLIMALAN
PTPEIMPEMA RAARPDAMIC TGRSDFPNQV NNVLCFPHIF RGALDCGART INEEMKMAAV
RAIAGLAREE PSDVAARAYS GETPVFGPDY LIPSPFDQRL ILRIAPAVAR AAAESGVATR
PIQDFDAYLD NLNRFVFRSG FIMKPVFAAA KNASKNRVIF AEGEDERVLR AAQVLLEEGT
AKPILIGRPQ IIETRLRRYG LRIRPDIDFE VVNPEGDPRY RDYVDDYFAL VGRLGVIPEA
ARTIVRTNTT VIGALAVKRG EADALICGVE GRYSRHLRDV SQIIGKRSGV LDFSALSLLI
SQRGATFFTD TYVSFSPSAE EIAQTTVMAA NEIRRFGITP RAALVSHSNF GSRDSESAFK
MRAALQIVRE LAPDLEVDGE MHGDSAISEG LRQRVMPDST LNGEANLLVF PNLDAANITL
GVVKTMTDSL HVGPILLGSA LPAHILSPSV TSRGVVNMAA LAVVESSYPV
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