Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1554 |
Symbol | |
ID | 5322412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1646059 |
End bp | 1647198 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640790499 |
Product | hypothetical protein |
Protein accession | YP_001327231 |
Protein GI | 150396764 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.126304 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCCTG CCCAAACAGA GACCGCTGCC GACGTCGTCG TCGATGAGGG CGCCGCCGGA AACGGTCGGC GTTATGTGTT CAGCGGCGAC TGGAGGCATG AGACGGCCGA GGCGATGAGT GCCAAGCTGA AGCGGCTTGG AAAACCGGCC GGCGGGCAGA GCGAGTTCGA TTTCTCCGGC ATCACGGCAA TGGATACGGC TGGTGCGTGG ATCATTCGTC GATTCATGAA CGGGACCGCC GACGAGGTTC GTTTCGCAGG CAGCGACCGG TATGCCGAAC TGATCCTCGC ACTGCCGAAG CAATTGCGCA GCCCGGAAGG GGAGACGGCA CGAGCACCAC TCTTCCAGCG GCTGTTTGCG CCTGTAGGTG AGCTGACGGT TTCCATATGG ACCGACACCG TCGCGGCCAT GTACATTCTG GGATCAGCGG TTCGCGGCGC TCAGATGAAG CTTGGGCGCC ATGCGGGCGT TTCACCCGCT GCGATCGTCC ATCAGATCGA CCGGATGGGC GTGATGGCGA CGCCGATCAT CACCCTGATG TCCTTCCTGA TCGGTGCCAT CATCGCGCAG CAGGGCGCAT TCCAGCTCCG CTCCTTCGGC GCCGAAATCT TCGTCGTCGA CCTCGTCGGC ATCCTGCAAC TGCGCGAGAT CGGCGTGTTG CTTACAGCGA TCATGATCGC CGGGCGATCG GGAAGTGCGA TTACCGCCGA GATAGGCTCG ATGAAGATGC GCGAAGAGGT CGACGCGCTC AAAGTCATGG GCTTGAGCCC GATCGGCGTT CTCGTCTTTC CGCGCCTCGT GGCCCTGACG ATCGTCCTGC CGCTCCTGAC GATCATCGCG AACTTCGCCG CCCTTGCCGG CGCCGCCATG GTGGCCTGGG CCTATTCCGG CATCACGATT CCGACTTTCC TGGCGCGTTT GCAGGAGGCG GTCGATTTCT CTTCCGTCGC GGCCGGCATG ATCAAGGCAC CCTTCATGGC GCTCATCATC GGCGTCGTTG CCGCGGTCGA AGGATTGAAG GTCGGCGGCA GTGCCGAGTC GCTTGGGCGG CGGGTGACCT CGTCCGTCGT CAAGTCGATA TTCGTCGTGA TCCTGATCGA CGGACTGTTC GCCATATTCT ACGCGGCAAT CGATTTCTGA
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Protein sequence | MTPAQTETAA DVVVDEGAAG NGRRYVFSGD WRHETAEAMS AKLKRLGKPA GGQSEFDFSG ITAMDTAGAW IIRRFMNGTA DEVRFAGSDR YAELILALPK QLRSPEGETA RAPLFQRLFA PVGELTVSIW TDTVAAMYIL GSAVRGAQMK LGRHAGVSPA AIVHQIDRMG VMATPIITLM SFLIGAIIAQ QGAFQLRSFG AEIFVVDLVG ILQLREIGVL LTAIMIAGRS GSAITAEIGS MKMREEVDAL KVMGLSPIGV LVFPRLVALT IVLPLLTIIA NFAALAGAAM VAWAYSGITI PTFLARLQEA VDFSSVAAGM IKAPFMALII GVVAAVEGLK VGGSAESLGR RVTSSVVKSI FVVILIDGLF AIFYAAIDF
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