| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1552 |
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| Symbol | |
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| ID | 5322410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1643779 |
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| End bp | 1645155 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640790497 |
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| Product | hypothetical protein |
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| Protein accession | YP_001327229 |
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| Protein GI | 150396762 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.394461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.189115 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATGG AAACTAAAGC GAATTATGCC ATTGTCGGCT TCTTCACCGT CCTGGTCATC
GCGGCCGCCT TCGGTTTCGT CTACTGGATG TCGCAATATG GCCGCACCGG CCAAATGGTC
CAGCTCGTCG TCAATATTCC CGGATCGGCA AATGGCCTGT CGGTAGGCTC GCCGGTTCGC
TTCAATGGCA TCAATGTCGG CAGCGTCCGT AATCTCGCGA TCGATGCCAA CGATCCGCGC
TATTCGATCG CAATAACCGA AGTCTCAGCC GATGCGCCTG TGATGAAATC TACGACCGCC
ACTCTCGAAG TTCAGGGCCT TACGGGAGCG GCCTATATCG AGCTCAGCGG TGGGCGCAAA
GGGGACGAGA ATATTCTGAA GACCGCTTTG GAAAGAGGCA CCCAGGCGCA TATACTTGCC
GATCAGTCGA GCGTCACCAG CCTGCTGGCG ACTGCGGACC AGATCCTCGA CCGGGCGAAT
TCGGCGATCA CGGATATTCA AAGCTTCGTC ACCGACGTCC GTGGGCCGCT GACCTCAACC
ATCGGCAATG CCGAACGATT CTCCAAGGCG CTTGCGGACA ATTCCGATGC CATCGACCAG
TTCCTGGAGA GCGTCGAACA ACTGTCTGGC TCCGTCAACG CAGCATCCAA GAAACTCGAC
GATACGCTTG CCGGTGCCGA CAGGCTGATC AAAGCGGTAG ACCCGAAGAA GATCGAGAAC
ATCGTCGGCA ATGCCGAGCA GGTGAGTAAC AATCTAAAGA ATGCTTCCGG CGAGGTGACC
GAAACGGTTG CCAGCTTCCA GCGTACGTTG GAAACCTACA ATCAGTTCGG CAAGAATGCC
CAGCAGACGT TGGAACGCGT CGATGCACTG GTTGCCGCGG TGGATTCGCA GAAGGTCGGC
TTGGTCGTCA ACGACATCAC GGCTGCGAGC GCGGACGCCC GCAAGGTCGC CGCGCAAGTC
TCGGATTTTG CTGAAAAGAT TTCCGCCCGG CAGGGGGATA TCGATCAGAC GATCACCGAT
TTCACGCAAA TGTCGAACAA GCTGAATGCA GCTTCGGGCC GAGTGGACAG CATACTCGTG
AAGATCGACG GATTTCTCGG AGACGCTGAC GCTCCGTCGC TTTCGGCGCA GGCACGCGAA
ACGCTCGAGT CGTTCCGGCG GGTGGCGGAA AACCTGAACG CACAGCTCGG TCCGATCGCC
GAAAATCTCA AGCGATTCTC CAATTCCGGA CTTCGAGATG TGGAGGCCCT GATCGGCGAT
ACACGCCGCA CGGTGCAAGG TCTGCAAAAT ACGATTTCCG AATTCGATAA AAATCCGCAA
CGGCTTTTGT TCGGCGGCGA AACGGTTAAG CAATATGATG GCCGCACGCG TCGGTGA
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| Protein sequence | MPMETKANYA IVGFFTVLVI AAAFGFVYWM SQYGRTGQMV QLVVNIPGSA NGLSVGSPVR
FNGINVGSVR NLAIDANDPR YSIAITEVSA DAPVMKSTTA TLEVQGLTGA AYIELSGGRK
GDENILKTAL ERGTQAHILA DQSSVTSLLA TADQILDRAN SAITDIQSFV TDVRGPLTST
IGNAERFSKA LADNSDAIDQ FLESVEQLSG SVNAASKKLD DTLAGADRLI KAVDPKKIEN
IVGNAEQVSN NLKNASGEVT ETVASFQRTL ETYNQFGKNA QQTLERVDAL VAAVDSQKVG
LVVNDITAAS ADARKVAAQV SDFAEKISAR QGDIDQTITD FTQMSNKLNA ASGRVDSILV
KIDGFLGDAD APSLSAQARE TLESFRRVAE NLNAQLGPIA ENLKRFSNSG LRDVEALIGD
TRRTVQGLQN TISEFDKNPQ RLLFGGETVK QYDGRTRR
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