| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1543 |
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| Symbol | |
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| ID | 5322401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1635852 |
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| End bp | 1637705 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640790488 |
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| Product | ABC transporter related |
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| Protein accession | YP_001327220 |
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| Protein GI | 150396753 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.103422 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGGCT GGTTTGAATC CCGCCTCAAC CCTTATCCGA CGGAGGAGCC GACGCTTCCG
CCGAAGGGTC TTTTTGCCTT TTGCTGGCAC TATACGAAGC CTGCGGCTCC GTGGCTTTTC
ATCATGTCTC TCTGCACCAT GCTGATCGCC ATCGGCGAGG TGGCCCTGTT CCAGTTCCTG
GGCAATATAG TCGACTGGTT GTCCAGCGCC GACCGCGAAA CCTTCCTGTC AGCCGAGGGC
GGCAGGCTGG CCTGGATGGC AGCGCTGATT CTCATCGGCC TGCCGGGGCT GGTAGCGCTC
GACTCCTTCG TCATGCATCA GGTGTTGCTC GGCAACTATC CGATGATCGC GCGCTGGCAA
ATGCACCGCT ATCTGCTCAG ACAGAGCATG ACATTCTTCG CCAACGAGTT TGCCGGGCGA
GTGGCGACCA AAGTCATGCA GACGTCGCTT GCCGTGCGTG AAACCGTGAT GAAGATCCTC
GACGTCTTCG TCTATGTGGT GAGCTATTTC GCGACGATGT TGATTGTCGT GGCGGCCGCG
GATTGGCGCC TGGTGATGCC ACTCGGGGTG TGGCTCGTCA TCTATATCGT CATCGTCACC
TATTTCGTGC CGCGTCTGCA GAAGATTTCT AAAGAACAGG CCGACGCGCG GTCGATGATG
ACCGGGCGCA TCGTCGACAG CTACACCAAT ATCGGCACCG TCAAGCTTTT CTCTCATGCG
GGGCGGGAGG AGACGTATGC CCGTTCGGGC ATGGACGAAT TTCTCGGCAC TGTTCACCGG
CAGATGCGGA GGGTCACGCT GTTCCACATC TTCGTTTACG CAAACAACTG TGTGGCACTC
TTCTCCGTCG GCGCCCTCGG GATCTATCTG TGGCTGACGA GCGGGATCTC CGTTGGCGCG
ATAGCCGTCG CGATCGGTCT TGCGATGCGC GTCAATGGCA TGTCGCAGTG GATCATGTGG
GAAGTGTCGG CTCTGTTCGA GAATATAGGT ACGGTCTATG ACGGCATGGG CATGATGACC
AAGGCCCATG ACATCGTCGA CAAGCCGAAT GCCGCGACGC TCCGGGCTGA CAAGGGCGCG
ATCAGATTCC AGGACGTCCG CTTCCATTAC GGCAAGGCCA AGGGCGTCAT TGATCAGCTG
TCGCTGGATA TCCGGCCCGG AGAGAAGATC GGCCTTGTCG GTCGCTCGGG CGCCGGCAAG
ACGACGCTGA TGAACCTGCT TCTGCGCTTC TACGATCTGG AGTCCGGCGC GATCCGGATA
GATGGCGTGG ACATCTCGAC GGTGACCCAG GACAGTCTGC GTTCGCAGAT CGGCGTTGTC
ACGCAAGACA CATCGCTCCT GCATCGCTCC ATTCGCGACA ACATCGCCTA TGGACATCCG
CAGGCAAGCG ACGCGGACAT CATAGCCGCC GCAAAGAAAG CGAATGCCTG GGACTTTATC
CAGGCGCTTG AAGACAATAT GGGTCGGCAA GGGCTCGACG CTCAGGTTGG CGAACGCGGG
GTGAAGCTTT CGGGTGGCCA GCGGCAGAGG ATCGCTATCG CCCGTGTTTT CCTGAAGGAT
GCACCGATCC TCATCCTCGA TGAAGCGACT TCCGCGCTCG ATTCCGAAGT CGAGGCGGCA
ATCCAGGAGA ACCTCTTCGC ACTGATGGCC GGCAAGACGG TGATCGCCAT CGCCCACCGT
CTGTCGACGC TGACGGAAAT GGACCGTCTG GTCATCCTGG AAGCGGGCCG AATCGTCGAG
ACGGGTTCTC ATGCCGAGCT CGTTGCCAGG CGCGGCATTT ACGCCGATCT CTGGTCGCGT
CAGTCCGGCG GCTTCATAGC CGACGAGGTC GAAAAAGAGG CGGCGGCGGA GTAA
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| Protein sequence | MFGWFESRLN PYPTEEPTLP PKGLFAFCWH YTKPAAPWLF IMSLCTMLIA IGEVALFQFL
GNIVDWLSSA DRETFLSAEG GRLAWMAALI LIGLPGLVAL DSFVMHQVLL GNYPMIARWQ
MHRYLLRQSM TFFANEFAGR VATKVMQTSL AVRETVMKIL DVFVYVVSYF ATMLIVVAAA
DWRLVMPLGV WLVIYIVIVT YFVPRLQKIS KEQADARSMM TGRIVDSYTN IGTVKLFSHA
GREETYARSG MDEFLGTVHR QMRRVTLFHI FVYANNCVAL FSVGALGIYL WLTSGISVGA
IAVAIGLAMR VNGMSQWIMW EVSALFENIG TVYDGMGMMT KAHDIVDKPN AATLRADKGA
IRFQDVRFHY GKAKGVIDQL SLDIRPGEKI GLVGRSGAGK TTLMNLLLRF YDLESGAIRI
DGVDISTVTQ DSLRSQIGVV TQDTSLLHRS IRDNIAYGHP QASDADIIAA AKKANAWDFI
QALEDNMGRQ GLDAQVGERG VKLSGGQRQR IAIARVFLKD APILILDEAT SALDSEVEAA
IQENLFALMA GKTVIAIAHR LSTLTEMDRL VILEAGRIVE TGSHAELVAR RGIYADLWSR
QSGGFIADEV EKEAAAE
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