Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1539 |
Symbol | |
ID | 5322397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1630779 |
End bp | 1631648 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640790484 |
Product | cytochrome c1 |
Protein accession | YP_001327216 |
Protein GI | 150396749 |
COG category | [C] Energy production and conversion |
COG ID | [COG2857] Cytochrome c1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.432409 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGC TTGTTACAGG CATTCTGTCA CTCGCTGTCG TCGCCGGTCT CGGGTTTGGA GCGGCTATCG CCCAGGACGA AGCAGCCGGC GAGGAGCATG GCGGGGGCAC CCCCCATTAC CCCATCCACA AGCCGGAACA GCAGGACTGG ACCTTTGCCG GCCTGTTCGG ACACTACGAC AAGGGCCAGC TGCAGCGCGG CATGAAGGTC TACACCGAAG TCTGTTCGGC CTGCCATTCG ATGGAGCTCG TCTCCTTCCG AACGCTTGAG AACCTGGGAT ACTCCGAAGC CCAGGTGAAA GCCTTCGCGG CGAATTATGA GGTCGAGGAT GGGCCAAAAG CGGATGGCGA GATGTTTACC CGCAAGGCCG TTCCATCCGA CTACTTTCCG TCGCCCTTCC CGAACAAGGA AGCCGCTGCC GCATCGAACA ACGGCGCCGC ACCGCCGGAC TTCTCGCTCA TCGCCAAGGC GCGCGGCATT GAACGCGGTT TCCCGCAGTT CGTCTTCGAT ATGTTCTGGC CCTACCAGGA GGGCGGTCCT GACTACATCC ATGCGCTTCT GACCGGCTAC CAGGATCCGC CGGCGGGTGT GGAAGTGGCT GAAGGTACCC ATTACAACCC GTATTTCGCC AGTGCCGCGG CCTTGGCGAT GGCGCCGCCG CTCTCCGACG ATCAGGTAAC CTATGACGAC GGCGCCCCCC AGACCGTCGA CCAGTACTCC AAGGATGTCT CGGCGTTCCT GATGTGGGCC GCTGAGCCGC ATCTGGAAGA TCGCAAGCGT ACTGGCTTCA TGGTCATGGT GTTCCTGCTC ATCTTCACTG GCCTCATTTA CCTGACGAAG AAGTCGGTCT ACGCCAACAA GGAACATTGA
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Protein sequence | MKKLVTGILS LAVVAGLGFG AAIAQDEAAG EEHGGGTPHY PIHKPEQQDW TFAGLFGHYD KGQLQRGMKV YTEVCSACHS MELVSFRTLE NLGYSEAQVK AFAANYEVED GPKADGEMFT RKAVPSDYFP SPFPNKEAAA ASNNGAAPPD FSLIAKARGI ERGFPQFVFD MFWPYQEGGP DYIHALLTGY QDPPAGVEVA EGTHYNPYFA SAAALAMAPP LSDDQVTYDD GAPQTVDQYS KDVSAFLMWA AEPHLEDRKR TGFMVMVFLL IFTGLIYLTK KSVYANKEH
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