Gene Smed_1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1536 
Symbol 
ID5322394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1622486 
End bp1622806 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content60% 
IMG OID640790481 
Productferredoxin 
Protein accessionYP_001327213 
Protein GI150396746 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.471115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.820565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAC TTACGATCGT AGCCTTTGAC GGCGCGCGCC ACGAACTCGA TGTCGAGAAT 
GGGTCCACGG TCATGGAGAA TGCAGTTCGC AATTCGGTCC CCGGGATCGA AGCCGAGTGC
GGCGGCGCCT GTGCCTGTGC GACCTGTCAC GTCTATGTCG ACGATGCCTG GGCGGCTCAA
GTCGGCGCTC CCGAAGCGAT GGAAGAGGAT ATGCTGGACT TCGCCTATGA TGTGCGTCCG
ACGTCGCGTC TCTCCTGTCA GATCAAGGTG AGCGAAGCTC TGGACGGACT CATAGTCCAT
GTCCCGGAGC GTCAGGCCTG A
 
Protein sequence
MTKLTIVAFD GARHELDVEN GSTVMENAVR NSVPGIEAEC GGACACATCH VYVDDAWAAQ 
VGAPEAMEED MLDFAYDVRP TSRLSCQIKV SEALDGLIVH VPERQA