Gene Smed_1526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1526 
Symbol 
ID5322384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1613425 
End bp1614417 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content66% 
IMG OID640790471 
Productputative CheA signal transduction histidine kinase 
Protein accessionYP_001327203 
Protein GI150396736 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.268978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.80072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAAA CAATCCTGGG GGACAATACC AGCCGGTTCA TGATCGCCGC CGGAGCGGTT 
GCGATCGGTC TCCTGTGCCT GGCGGCCGTG CTTCGGCTGA TTCGCAACAA GCCTTCTTCT
CCTTTCGTTC GTGGCGGCAA AAACAGGCAG CCCCGGCTGG CGGTGCTCGA TGCCGCCGCC
GTTGATACGC GCCGCCGCCT GGTGCTCGTC CGCCGCGACG ACGTCGAGCA CCTGATCATG
ATCGGCGGCC CGACGGATAT CGTGATCGAA AGCCGCATCG CGCCCGAGCA AGAAAGCCCG
GGCCCGGCGA ATCTCCAATC GAAGCCGGAA GAAAAGGCCG CCCCTGCGCC GATCGCGGAA
GCCCGGCCCC AATCCGTTTC TTCCCCTCTT CCCACGCGGA CGCCTCTCCC GGCGGAAGCT
GCCGTGGAGA CCGTTCGGCA ATCGGCGCAG ACGAACGAGT CGCCACGCGT TGCCGCGCGC
GCCGAACCTT CCACCCGCTC GGTCCCGGAT CCACAGGCCC CGGTCCAGGG TCCGTCATCG
CCGCTGCAAG TTTCCAGGCC TTCACCTGCG CCACAGATTC CACCCCTATC CGTCGCCGTC
GAGCCGTCGC ACGCTGATTT CGGCGCCCTT CGCGGTCAAG CGCTTCCACT GGAGCCACCC
ACTCGCAACG AGCGCACGGT TCCGCTTGCC GCGGTCGAAC CCGTGAGGCC GGCGATTGAG
CCGGTCAAAG CCATGCCGGA CCTACCGCTG CCACCCCGGC GCGCAGAGCC CGAAGCGGCA
GCGGAATTCG AGCGCATGCT CGATGCGGAA ATAAGCGGCG ATCTCCAGCG CCTGGCACCC
ACCGCTCAGC CCCGACCGGA GATCCGGCCG GCTGCCGCCG GTCGCCAGGA ACCGATTCTC
GGATCGCCCC TGCAGGACAG CCGCAAGGAG CCGACGATCG AGGAAGAGAT GGAAAGAATG
CTCTCGGATA TATCCGCTGG CCGCAAACTG TAA
 
Protein sequence
MMETILGDNT SRFMIAAGAV AIGLLCLAAV LRLIRNKPSS PFVRGGKNRQ PRLAVLDAAA 
VDTRRRLVLV RRDDVEHLIM IGGPTDIVIE SRIAPEQESP GPANLQSKPE EKAAPAPIAE
ARPQSVSSPL PTRTPLPAEA AVETVRQSAQ TNESPRVAAR AEPSTRSVPD PQAPVQGPSS
PLQVSRPSPA PQIPPLSVAV EPSHADFGAL RGQALPLEPP TRNERTVPLA AVEPVRPAIE
PVKAMPDLPL PPRRAEPEAA AEFERMLDAE ISGDLQRLAP TAQPRPEIRP AAAGRQEPIL
GSPLQDSRKE PTIEEEMERM LSDISAGRKL