| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1525 |
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| Symbol | |
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| ID | 5322383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1610442 |
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| End bp | 1613060 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790470 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001327202 |
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| Protein GI | 150396735 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.40409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAAT TGCGGCAGGC AGGTGACTAC CAGATGCCGG TCGTTGACCG AGGCGTTCGT
CCGGGAACCA TTCTCAGGAT CATCCTGCTG GCGATCGTCC TTACGGCGTC GGCAGCCGCA
TTCGTCGTCT TCAAGAACCA GCTCGAAAAC GAGATCGTCC TCGGCATTCT CGGCGTTCTG
GCCATGGTGG GCATATTCTT TCTGGTCTCG TCGGTCATAG GCTTCATCGA GGTGATGCCG
CAATCGCGCC CGGACGAGCT GGCCCGCGCC TTCCTCGATG CCCACGAGGA CGGGACGATC
GTGACCGACC GCAAGGGGCG CATCATCTAC GCCAACGCCG CTTACGGTGC TCTGACCGGT
ACCAAGAGTG CGGCAGGCAT TCAGTCACTT GAAACGATCC TGTCGCGCAA CAGGGAAGCG
ACCGAGGCGA TCTACCGCCT GACCAACGGT CTGCACGAGG GCAAGCAGGG GCACGAGGAA
TTCCGCCTGC TAAAGCCTCT GGCGAATGGG AAGATGGCCG GTTCCGGCGC CCATTGGTAC
CGGCTGAAGG CGCGGGTACT GCCGCTCGAG GACGCCGGCA GCAATCCGCT CTATCTATGG
CAGATCGCAG ACATCACCGC AGAGCGCGAC GAGCAGGAGC GTTTCTTCAA GGAATTGCAG
AACGCGATCG ACTATCTCGA CCACGCGCCG GCGGGGTTCT TCTCTGCCGG GCGAAAGGGT
GAGATCTTCT ATATCAACGC GACCCTTGCA GATTGGCTCG GGATCGATCT GACCAAATTC
CAGCCTGGCT CCGTCAGCAT TGCCGAACTC GTCGCGGGCG AGGGGCTGGC GCTCGTACAA
TCGGTTCAGG CGGAGCCCGG TCTCAAGAAG ACCAAGATCC TGGATCTCGA TCTGCGGAAG
GCCAATGGGC AGAGCCTGCC GGTGCGCCTG GTCCATCGCG TCTCTTCCAC GCGGGATGGC
GCCCCCGGTG AAAGCCGCAC GATCGTAATG TCCCGGGAGG GCGATGATGG CGATCAGTCG
GCATCGAATG CCGCCATGCG ATTCACCCGC TTTTTCAACA ATACGCCCAT GGCGATCGCC
TCTGTGGATG GAAACGGGCG CATTCTCAGA ACCAATGCTC CTTTCATGAA GCTCTTCGCC
GGCCTCGTTT CGCAGGACGA GGTCGAGCGC GGTGCCCTGA TCGACGCGGT CGTGCACCAT
TCCGAAAGGG GGCGCCTGCA GGAATCGCTT GCTGCCGCGA AGGACCGGCA GAGCGATATT
GCGCCGATCG ATGCGCTTCA TCCGAAGGAT GAGGGGCGCC ACTTCCGCTT CTATGTGAAT
GCGGTCATCG ATCAGACGGA TCAGGCGCCC GAGGAGGCGG CGATAATTTA TGCGCTGGAG
ATCACCGAGC AGAAGGCGCT CGAGAACCAG ATGGCGCAGA CGCAGAAGAT GAATGCCGTC
GGAACCCTTG CCGGAGGCAT TGCCCATGAT TTCAACAACG TCCTGACCGC CATCCTGCTT
TCCGCCGACC ACCTGCTGCT ATCGGCGCGA CCGGCGGATG CCACTTTCGC CGATCTGATG
GAGATCAAGC GCAACGCAAA CCGGGCCGCC GTTCTCGTGC GGCAATTGCT CGCCTTCTCG
CGCAAGCAGA CCATGCGGCC GACGGTGCTC AATCTCACCG ACGTCATCGG CGACCTCAGA
ATGCTCGTCG ACCGCATGAC CGGCACCAAT GTCAAGGTGG AGGTGGACTA CGGCCGCGAT
CTCTGGCCGG TGAGGACCGA TCTCGGCCAG TTCGAACAGG TGCTCCTGAA CCTGGCCGTG
AATGCCCGCG ATGCGATGCC CGCGGGTGGG ATCATCACGC TTCGGACACG CAATCTGCCG
GCGGGCGAAG TAGCCGCACT CGGGCGTCGG GAACTGCCCG AGGAAGACTT CGTGATGGTA
GAAGTATCTG ACGAGGGCAC CGGCATCTCA CCCGAGATCA TGGACAAGAT CTTCGAGCCC
TTCTTCACCA CCAAGGACGT CGGCAAGGGG ACCGGGCTCG GATTGTCGAT GGTCTACGGC
ATCGTGAAGC AGTCCGGCGG CTATATTTAT CCCGAGTCGG AGATCGGCAG CGGAACCACG
TTCCGCATCC TGCTGCCGCG GCATATCGAT GTTCCGGAGA CACAGGAGGA GCCGAGCTCC
GACAGGGCGG CGGCGGAAAC GGCCGCGCCT GCCAGGATCG AACCGGTTGC GGTGCCCATG
CCTCGGGCAG AGCCTGCCGA CCTCACCGGA GATTCCGCCG TCGTGCTGCT GGTCGAAGAC
GAGGAAGCGG TCCGGCGCGG GGGCAAGAGA ATGCTGGAGA CGCGCGGCTA TACGGTGCAC
GAAGCTGGGT CGGGCGTCGA GGCGCTGGAG ATCATGGAGG AGCTCGCCGG TGCCGTCGAT
ATCGTCGTAT CCGACGTGGT AATGCCGGAA ATGGACGGGC CGACGCTGCT GCGCGAACTG
CGCAAGAAGT ATCCCGACCT GAAATTCATC TTCGTCTCCG GCTATGCCGA AGACGCCTTT
GCCCGCAATC TGCCTGCCGA TGCGAAGTTC GGTTTCCTGC CGAAGCCGTT CTCGCTGAAA
CAGCTTGCGG TCGCCGTGCG CGAGATGCTC GACAGCTGA
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| Protein sequence | MTKLRQAGDY QMPVVDRGVR PGTILRIILL AIVLTASAAA FVVFKNQLEN EIVLGILGVL
AMVGIFFLVS SVIGFIEVMP QSRPDELARA FLDAHEDGTI VTDRKGRIIY ANAAYGALTG
TKSAAGIQSL ETILSRNREA TEAIYRLTNG LHEGKQGHEE FRLLKPLANG KMAGSGAHWY
RLKARVLPLE DAGSNPLYLW QIADITAERD EQERFFKELQ NAIDYLDHAP AGFFSAGRKG
EIFYINATLA DWLGIDLTKF QPGSVSIAEL VAGEGLALVQ SVQAEPGLKK TKILDLDLRK
ANGQSLPVRL VHRVSSTRDG APGESRTIVM SREGDDGDQS ASNAAMRFTR FFNNTPMAIA
SVDGNGRILR TNAPFMKLFA GLVSQDEVER GALIDAVVHH SERGRLQESL AAAKDRQSDI
APIDALHPKD EGRHFRFYVN AVIDQTDQAP EEAAIIYALE ITEQKALENQ MAQTQKMNAV
GTLAGGIAHD FNNVLTAILL SADHLLLSAR PADATFADLM EIKRNANRAA VLVRQLLAFS
RKQTMRPTVL NLTDVIGDLR MLVDRMTGTN VKVEVDYGRD LWPVRTDLGQ FEQVLLNLAV
NARDAMPAGG IITLRTRNLP AGEVAALGRR ELPEEDFVMV EVSDEGTGIS PEIMDKIFEP
FFTTKDVGKG TGLGLSMVYG IVKQSGGYIY PESEIGSGTT FRILLPRHID VPETQEEPSS
DRAAAETAAP ARIEPVAVPM PRAEPADLTG DSAVVLLVED EEAVRRGGKR MLETRGYTVH
EAGSGVEALE IMEELAGAVD IVVSDVVMPE MDGPTLLREL RKKYPDLKFI FVSGYAEDAF
ARNLPADAKF GFLPKPFSLK QLAVAVREML DS
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