| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1524 |
|---|
| Symbol | |
|---|
| ID | 5322382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 1609421 |
|---|
| End bp | 1610350 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640790469 |
|---|
| Product | indigoidine synthase A family protein |
|---|
| Protein accession | YP_001327201 |
|---|
| Protein GI | 150396734 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2313] Uncharacterized enzyme involved in pigment biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0175731 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAACC CCTCCTCCTC GTCCCTGACG ATCGACTATT CAGACGAAGT CGCGGCTGCC
AAGCAACGCG GTGCGCCGAT CGTGGCCCTG GAATCGACGA TCATCACGCA TGGCATGCCC
TATCCCGGCA ATCTCGACAT GGCCCGCAGC GTCGAGACGA TCATCCGTGA ACAGGGCGCC
GTGCCGGCGA CCATTGCCGT CATCCACGGG GTCCTGCATA TCGGCCTCGA CGGCGCCGAG
CTGGAGGCGC TGTCGACGAC GCAGGGCGCG ATGAAGCTTT CACGCGCCGA TCTTGCCTTT
GCCATTGCCG AACGCCGTAC AGGCGCCACG ACAGTTGCCG CAACCATGAT CGCCGCCGCC
CGCGCCGGCA TCAGGGTTTT CGCCACAGGC GGCATTGGCG GCGTTCACCG CGGCGCCGAG
CAGAGCTTCG ACATATCGGC GGATCTCGAC GAACTCGCGC GAACCGGCGT GATCGTCGTC
TGCGCGGGTG CCAAGGCCAT CCTGGATATT CCCAAAACGC TCGAGGTTCT TGAAAGCCGC
GGCGTGCCGG TCGTAACTTA TGACAGCGAG AACTTCCCGG CCTTCTGGTC GCGCGAATCC
GGCCTCAAGA GCCCGCTGAT GCTGAACAGC CCGGCGGCGA TCGCCAGTTT CCAGCGAACG
CGCGAACTGC TCGGAATCGA AGGGGGGATG CTTGTCGCCA ATCCGGTGCC CGAAGAAAGC
GAAATCCCGC GCGAGGAGAT GGAGATCTAT ATCACCCGCG CGATCGACAA CGCGGCAAGC
GAAGGAATTA CCGGCAAGGC TGTCACGCCG TACCTGCTCG ACAACCTCTT CCGCTTGACG
GACGGTCGCA GCCTCGAAAC CAATATTGCG CTGGTCGAAA ACAATGCACG CCTCGCTGCC
GAAATCGCTG TCGCTCTTGC GATGAAGTAA
|
|---|
| Protein sequence | MTNPSSSSLT IDYSDEVAAA KQRGAPIVAL ESTIITHGMP YPGNLDMARS VETIIREQGA
VPATIAVIHG VLHIGLDGAE LEALSTTQGA MKLSRADLAF AIAERRTGAT TVAATMIAAA
RAGIRVFATG GIGGVHRGAE QSFDISADLD ELARTGVIVV CAGAKAILDI PKTLEVLESR
GVPVVTYDSE NFPAFWSRES GLKSPLMLNS PAAIASFQRT RELLGIEGGM LVANPVPEES
EIPREEMEIY ITRAIDNAAS EGITGKAVTP YLLDNLFRLT DGRSLETNIA LVENNARLAA
EIAVALAMK
|
|---|
| |