| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1521 |
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| Symbol | alaS |
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| ID | 5322379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1604020 |
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| End bp | 1606683 |
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| Gene Length | 2664 bp |
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| Protein Length | 887 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640790467 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001327199 |
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| Protein GI | 150396732 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCG TGAATGAAAT CCGGTCGATG TTCCTCGACT ATTTCCGCAA GAACGGTCAC
GAGGTCGTAC CGTCCAGCCC CCTCGTGCCG CGCAACGACC CGACATTGAT GTTCACCAAT
GCGGGTATGG TGCAGTTCAA GAACGTGTTC ACCGGGCTCG AGCAGCGCCC TTATTCGACC
GCGGCAACGG CGCAGAAATG CGTGCGCGCC GGCGGCAAGC ATAACGATCT CGATAATGTC
GGCTACACCG CCCGGCACCA TACCTTCTTC GAGATGCTCG GAAACTTCTC CTTCGGCGAC
TATTTCAAGG AGCGGGCCAT CGAGCTTGCC TGGAACCTGA TCACCAAGGA ATACGGTCTC
GATGCCAAGC GTCTTCTCGT CACGGTGTAC CACACCGACG ACGAAGCCTT CGGCCTGTGG
AAAAAGATCG CCGGCTTGAG CGACGATCGC ATCATCCGCA TTGCGACGAG CGACAACTTC
TGGGCCATGG GCGACACCGG TCCATGCGGG CCGTGCTCGG AAATATTCTA CGACCACGGC
GACCATATCT GGGGCGGCCC TCCCGGCTCG GCGGACGAAG ACGGCGATCG CTTCATCGAG
ATCTGGAATC TCGTCTTCAT GCAATACGAG CAGATCACGA AAGAAGAGCG CGTAGACCTG
CCACGCCCCT CGATCGACAC GGGCATGGGG CTGGAGCGCC TCGCCGCCGT GCTTCAGGGA
CAACACGACA ATTATGACAT CGACCTTTTC CGGGCGTTGA TTGCGGCGTC CGAGGAAGCA
ACAGGTGTCA AGGCCGAAGG CGACCGTCGC GCGAGCCATC GCGTGATCGC CGACCACCTG
CGTTCCTCCG CCTTTTTGAT CGCCGACGGG GTTCTGCCGT CGAACGAAGG CCGGGGGTAC
GTGCTGCGCC GGATCATGCG ACGCGCCATG CGCCACGCTC AATTGCTCGG CGCGCAGGAT
CCGCTGATGT GGAAGCTCCT GCCGGCACTG GTAGGCCAGA TGGGCCGCGC CTATCCGGAA
CTCGTCCGTG CCGAAGCGCT GATCTCCGAA ACGTTGAAGC TGGAGGAAAC CCGATTCCGC
AAGACCCTGG AGCGCGGTCT CAACCTTCTG GAGGAAGCTT CGGCCGATCT TTCCGAAGGC
GATCAGTTCA ACGGCGAGAC TGCCTTCAAG CTCTACGACA CCTACGGCTT CCCGCTCGAC
CTCACGCAGG ATGCTTTGCG CGCCAAAGGC ATCGGCGTAG ATACGGACGC ATTCACGGCC
GCCATGCAAC GGCAGAAGGC CGAAGCCCGT GCCAACTGGA CCGGCTCCGG CGATGCCGCG
ACCGAGACCA TCTGGTTCGA GCTCAGGGAC AAGCACGGTG CAACCGACTT CCTCGGCTAT
GACACCGAGT CGGCGGAAGG CGTCATTCAG GCGATCGTCC GGGACGGCAC CGTGGTTGAA
TCCGCCTCAA AGGGCGAGAC GGTACAGCTG GTCTTGAATC AGACGCCTTT CTACGGCGAG
TCGGGCGGTC AGGTGGGCGA CACCGGCGTC GTGACCACCG AATCCGGCAA GCTTACCGTC
ACCGACACGC AGAAGCGTGG CGAAGGGCTC TTCGTCCATT ATTGCGTCGT AGAGGAAGGC
AGCGTGAAGA CCGGCGAAGC GGCTGCCTTG GCGGTCGACC ATGCGCGCCG TACGCGTTTG
CGCGCCAACC ATTCCGCGAC GCACTTGCTG CACGAGGCGC TGCGTGAGGT GCTCGGCACC
CATGTTTCCC AAAAGGGTTC GCTCGTTGCG CCTGAGCGCC TTCGCTTCGA CGTCTCACAT
CCGAAGCCCA TGACATCGGA GGAGTTGAAG GTCGTCGAGG AGATGGCCAA CGAAATCATC
GTCCAGAACA CGCCGGTCGT CACACGGCTG ATGAGCGTCG ACGATGCGAT CGCCGAGGGT
GCCATGGCGC TCTTCGGCGA AAAATACGGC GACGAGGTGC GGGTCGTCTC CATGGGGCAG
GGCCTGCACG GCTCCAAAGC GGGTAAGGCA TATTCGGTGG AGCTATGTGG CGGCACGCAT
GTGTCCGCCA CCGGCGACAT CGGCCTCGTC CGCATCGTCT CTGAGAGCGC GGTCGGATCC
GGTGTCCGCC GGGTGGAAGC GCTGACCGGG GAGGCGGCGC GTGCCTATCT CGGCGAGCAG
GATGAGCGGG TGAAGGCACT CGCCGCGGCA CTCAAGGTTC AGCCCTCGGA CGTTCTCGGG
CGGGTCGAGT CGCTTCTGGA CGAAAGGCGA AAGCTGGAGC GGGAACTTAC CGAGGCGAAG
AAGAAGCTTG CGCTCGCCGG TGACGGTCAG AACGGTTCCG GCGAGGCTGC CCGTGAGATC
GGCGGTGTCC GGTTCCTCGG AAGGGTGGTC TCCGGCGTCG AGCCGAAGGA TCTGAAGAGC
CTTGCGGATG ACGGCAAGAA GACGCTCGGG TCGGGCGTGG TTGCCTTTGT CGGCGTCAGC
GGCGACGGCA AGGCAAGCGC AGTCGTGGCC GTGACTGACG ATCTCACGTC GAAAGTAAGC
GCTGTCGATC TGGTACGCGT CGCTTCCGCT GCACTCGGCG GAAAGGGAGG TGGCGGGCGC
CCGGACATGG CGCAGGCGGG CGGTCCGGAC GGCGGACGCG CGGCCGAGGC GATCGAGGCG
GTTGCCGTCG CGCTCGCCGG CTGA
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| Protein sequence | MSGVNEIRSM FLDYFRKNGH EVVPSSPLVP RNDPTLMFTN AGMVQFKNVF TGLEQRPYST
AATAQKCVRA GGKHNDLDNV GYTARHHTFF EMLGNFSFGD YFKERAIELA WNLITKEYGL
DAKRLLVTVY HTDDEAFGLW KKIAGLSDDR IIRIATSDNF WAMGDTGPCG PCSEIFYDHG
DHIWGGPPGS ADEDGDRFIE IWNLVFMQYE QITKEERVDL PRPSIDTGMG LERLAAVLQG
QHDNYDIDLF RALIAASEEA TGVKAEGDRR ASHRVIADHL RSSAFLIADG VLPSNEGRGY
VLRRIMRRAM RHAQLLGAQD PLMWKLLPAL VGQMGRAYPE LVRAEALISE TLKLEETRFR
KTLERGLNLL EEASADLSEG DQFNGETAFK LYDTYGFPLD LTQDALRAKG IGVDTDAFTA
AMQRQKAEAR ANWTGSGDAA TETIWFELRD KHGATDFLGY DTESAEGVIQ AIVRDGTVVE
SASKGETVQL VLNQTPFYGE SGGQVGDTGV VTTESGKLTV TDTQKRGEGL FVHYCVVEEG
SVKTGEAAAL AVDHARRTRL RANHSATHLL HEALREVLGT HVSQKGSLVA PERLRFDVSH
PKPMTSEELK VVEEMANEII VQNTPVVTRL MSVDDAIAEG AMALFGEKYG DEVRVVSMGQ
GLHGSKAGKA YSVELCGGTH VSATGDIGLV RIVSESAVGS GVRRVEALTG EAARAYLGEQ
DERVKALAAA LKVQPSDVLG RVESLLDERR KLERELTEAK KKLALAGDGQ NGSGEAAREI
GGVRFLGRVV SGVEPKDLKS LADDGKKTLG SGVVAFVGVS GDGKASAVVA VTDDLTSKVS
AVDLVRVASA ALGGKGGGGR PDMAQAGGPD GGRAAEAIEA VAVALAG
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