| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1519 |
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| Symbol | |
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| ID | 5322377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1601963 |
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| End bp | 1603177 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640790466 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_001327198 |
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| Protein GI | 150396731 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.997525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGA TCAAGGTCGC CAATCCGGTC GTCGAACTCG ACGGCGACGA GATGACCCGC
ATCATATGGC AGTTCATCAA GGACAAGCTG ATCCATCCCT ATCTCGACCT CGATCTCGAA
TATTATGACC TCGGCGTCGA GAACCGCGAC GCAACCGACG ATCAGGTGAC GATCGACGCC
GCGAACGCGA TCAAGAAGCA CGGCGTCGGC GTCAAATGCG CAACGATCAC GCCGGACGAA
GGCCGCGTCG AGGAGTTCAA GCTGAAGAAG ATGTGGAAGT CGCCCAACGG CACGATCCGC
AACATCCTCG GCGGCGTCAT TTTCCGCGAG CCGATCATCT GCAAGAACGT GCCTCGCCTC
GTGCCCGGCT GGACAAAGCC GATCATCGTC GGCCGCCACG CCTTTGGCGA CCAGTATCGC
GCGACCGATT TCAAGTTTCC GGGAAAGGGC AAGCTTTCAA TCAAATTCGT CGGCGAAGAC
GGCCAGACGA TCGAGCATGA CGTTTACGAC GCGCCGGGCG CCGGTGTGGC ACTCGCCATG
TACAATCTCG ATGAGTCGAT CACCGAATTT GCGCGCGCCT CGTTCAATTA CGGCCTGCAG
CGCAAGGTCC CCGTTTATCT CTCGACCAAG AACACCATTC TCAAAGCCTA TGACGGCCGC
TTCAAGGACA TTTTCCAGAA GGTGTTCGAG GAGGAGTTCG CCGACCAGTT CAGGGCCGAG
AAGCTCTGGT ACGAACATCG TCTGATCGAC GACATGGTCG CCTCGGCGCT GAAATGGTCC
GGTGGCTATG TCTGGGCCTG CAAAAACTAT GACGGCGACG TCCAGTCCGA TATCGTTGCG
CAGGGCTTCG GCTCTCTCGG CCTGATGACT TCCGTTCTGA TGACGCCGGA CGGCAAGACG
GTCGAGGCGG AAGCTGCGCA CGGCACGGTC ACCCGCCACT ACCGGCAGCA TCAGAAGGGC
GAGGAAACCT CGACCAACTC GATCGCCTCG ATCTTCGCCT GGACCCGCGG CCTCGCGCAC
CGTGCCAAGC TCGACGGCAA CACCGAACTT GCGAAGTTCT CGGAGACGCT GGAGCGCGTC
TGCGTCGATA CGGTCGAATC GGGCTTCATG ACCAAGGATC TGGCGCTGCT CATCGGTCCC
GACCAACCCT GGCTGTCGAC CACCGGCTTC CTCGACAAGA TCGACGAGAA CCTCCGGAAG
GCCATGGCGG CCTGA
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| Protein sequence | MAKIKVANPV VELDGDEMTR IIWQFIKDKL IHPYLDLDLE YYDLGVENRD ATDDQVTIDA
ANAIKKHGVG VKCATITPDE GRVEEFKLKK MWKSPNGTIR NILGGVIFRE PIICKNVPRL
VPGWTKPIIV GRHAFGDQYR ATDFKFPGKG KLSIKFVGED GQTIEHDVYD APGAGVALAM
YNLDESITEF ARASFNYGLQ RKVPVYLSTK NTILKAYDGR FKDIFQKVFE EEFADQFRAE
KLWYEHRLID DMVASALKWS GGYVWACKNY DGDVQSDIVA QGFGSLGLMT SVLMTPDGKT
VEAEAAHGTV TRHYRQHQKG EETSTNSIAS IFAWTRGLAH RAKLDGNTEL AKFSETLERV
CVDTVESGFM TKDLALLIGP DQPWLSTTGF LDKIDENLRK AMAA
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