| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1514 |
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| Symbol | rpsD |
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| ID | 5322372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1595463 |
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| End bp | 1596080 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640790461 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_001327193 |
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| Protein GI | 150396726 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAAGC GCGAATCGTC CAAGTATAAA ATTGACCGCC GCATGGGCGA AAACATCTGG
GGCCGTCCGA AGTCCCCGGT CAACCGCCGT GAATATGGCC CCGGTCAACA CGGCCAGCGC
CGCAAGTCCA AGCTTTCCGA CTTCGGCGTG CAGCTGCGCG CCAAGCAGAA GCTGAAGGGC
TACTACGGCG ATATCCGTGA AAAGCAGTTT CGTGCGATCT TCGCCGAAGC ATCTCGCCGC
AAGGGCGACA CCCCGGAAAA CCTGGTCGGC CTGCTCGAGT CTCGCCTCGA CGCGATCGTT
TACCGCGCCA AGTTCGTTCC GACCGTTTTC GCCGCGCGCC AGTTCGTCAA TCACGGCCAC
GTCAAGGTCA ACGGCGTTCG CGTCAACATC GGTTCTTATC GTTGCAAGCC GGGCGACGTC
ATCGAAGTTA AGGAATCGTC CAAGCAGCTC GTTACGGTTC TCGAAGCCGT GCAGCTGGCC
GAGCGCGACG TTCCTGACTA TATCGAAGCC GATCACAACA AGATGGTCGC GACCTTCGTT
CGCGTTCCCG CTCTCGCTGA CGTGCCGTAC CCCGTCATCA TGGAACCGCA CCTGGTCGTC
GAATTCTATT CGCGTTAA
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| Protein sequence | MSKRESSKYK IDRRMGENIW GRPKSPVNRR EYGPGQHGQR RKSKLSDFGV QLRAKQKLKG
YYGDIREKQF RAIFAEASRR KGDTPENLVG LLESRLDAIV YRAKFVPTVF AARQFVNHGH
VKVNGVRVNI GSYRCKPGDV IEVKESSKQL VTVLEAVQLA ERDVPDYIEA DHNKMVATFV
RVPALADVPY PVIMEPHLVV EFYSR
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