| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1489 |
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| Symbol | |
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| ID | 5322347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1575045 |
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| End bp | 1575725 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640790437 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_001327169 |
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| Protein GI | 150396702 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0453865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGACCC ACCCCATTCG CATTGCCCCG TCCATCCTGG CGGCCGACTT CTCCAAGCTC
GGCCAGGAGG TTCGCGACGT CACCCAAGCG GGCGCCGACT GGATTCATCT CGATGTCATG
GACGGGCATT TCGTGCCTAA CATCACGTTC GGACCCGATG TCATCAAGTC GCTGCGCCCG
CACACCCAGG CGACCTTCGA CTGCCACCTG ATGATCGCGC CGGCCGACCC CTTTCTCGAG
GCATTTGCGA AGGCCGGTTG CGATATCATT ACCGTTCATG CCGAAGCAGG TCCGCATTTG
CACCGTTCGC TGCAGACGGT GAGGTCCCTC GGAAAAAAGG CCGGCGTCTC GCTTAATCCG
GCGACGCCGG AGGACGCTCT CGAATACGTG CTTGACACTG TCGACCTCGT TCTGGTCATG
ACGGTGAATC CGGGATTTGG TGGGCAAAAA TTTGTCGACG CGACCGAGGA GAAGATCCGC
CGGATAAAGG CAATGATCGG TAGCCGTCCG ATCGAAATCG AGGTGGATGG CGGTATAGCG
CCTGAAACGG CAGCAGTCGC GGCCAAAGCG GGTGCCAACG TACTGGTCGC GGGCTCAGCC
ATCTTCAAGG GCGGCTCCGT CGAATCCTAT CGCGGCGCCA TCGAAACGCT ACGCGCACGG
GCGGAAAAGG CGCGCGGATG A
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| Protein sequence | MMTHPIRIAP SILAADFSKL GQEVRDVTQA GADWIHLDVM DGHFVPNITF GPDVIKSLRP
HTQATFDCHL MIAPADPFLE AFAKAGCDII TVHAEAGPHL HRSLQTVRSL GKKAGVSLNP
ATPEDALEYV LDTVDLVLVM TVNPGFGGQK FVDATEEKIR RIKAMIGSRP IEIEVDGGIA
PETAAVAAKA GANVLVAGSA IFKGGSVESY RGAIETLRAR AEKARG
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