Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1486 |
Symbol | |
ID | 5322344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1572105 |
End bp | 1572605 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640790434 |
Product | flavin reductase domain-containing protein |
Protein accession | YP_001327166 |
Protein GI | 150396699 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0134699 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTGTGT TGGAGAAAAC CCGGCTGGAC CCGATAACCT ACCGTGACGC GATGAGCCGC ATGTCGTCGC ATGTGCAGCT GATCACTGCG GCCGATGGCA ATGAGCGGCG AGGCGTGACG ATCACCGCGT CCTGCTCGGT ATCGGACGAT CCGCCTACCG TGCTCGCTTG CCTCAACGCG GCGAATCGGC GCAATGATAT TTTCTCGCGC GGGGGCGGTT TTGCGCTGAA CCTCCTGAGC GACAGGCATC ACGCATTGGC TCACGCCTTT TCGGGCCGCG ATCAGCTCGA CATGGAGCGA CGTTTTTCCC TCGGCCGATG GGTGCAGCGC ACGACCGGCG CGCCTATCCT CGTCGATGCG ATCGCTGCTT TCGATTGCCG CCTGATCGAA GTCAAGATCG TGGCGACGCA TCTCATCCTC ATCGGCGAAG TGGTCGACGT CCAGCTCGGC GAGAAGCAGC CGCCGCTTAT TTATGTGGAC CGTGGATACC ACACGCTATA A
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Protein sequence | MCVLEKTRLD PITYRDAMSR MSSHVQLITA ADGNERRGVT ITASCSVSDD PPTVLACLNA ANRRNDIFSR GGGFALNLLS DRHHALAHAF SGRDQLDMER RFSLGRWVQR TTGAPILVDA IAAFDCRLIE VKIVATHLIL IGEVVDVQLG EKQPPLIYVD RGYHTL
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