Gene Smed_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1486 
Symbol 
ID5322344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1572105 
End bp1572605 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content61% 
IMG OID640790434 
Productflavin reductase domain-containing protein 
Protein accessionYP_001327166 
Protein GI150396699 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0134699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGTGT TGGAGAAAAC CCGGCTGGAC CCGATAACCT ACCGTGACGC GATGAGCCGC 
ATGTCGTCGC ATGTGCAGCT GATCACTGCG GCCGATGGCA ATGAGCGGCG AGGCGTGACG
ATCACCGCGT CCTGCTCGGT ATCGGACGAT CCGCCTACCG TGCTCGCTTG CCTCAACGCG
GCGAATCGGC GCAATGATAT TTTCTCGCGC GGGGGCGGTT TTGCGCTGAA CCTCCTGAGC
GACAGGCATC ACGCATTGGC TCACGCCTTT TCGGGCCGCG ATCAGCTCGA CATGGAGCGA
CGTTTTTCCC TCGGCCGATG GGTGCAGCGC ACGACCGGCG CGCCTATCCT CGTCGATGCG
ATCGCTGCTT TCGATTGCCG CCTGATCGAA GTCAAGATCG TGGCGACGCA TCTCATCCTC
ATCGGCGAAG TGGTCGACGT CCAGCTCGGC GAGAAGCAGC CGCCGCTTAT TTATGTGGAC
CGTGGATACC ACACGCTATA A
 
Protein sequence
MCVLEKTRLD PITYRDAMSR MSSHVQLITA ADGNERRGVT ITASCSVSDD PPTVLACLNA 
ANRRNDIFSR GGGFALNLLS DRHHALAHAF SGRDQLDMER RFSLGRWVQR TTGAPILVDA
IAAFDCRLIE VKIVATHLIL IGEVVDVQLG EKQPPLIYVD RGYHTL