| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1484 |
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| Symbol | |
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| ID | 5322342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1569857 |
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| End bp | 1571146 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640790432 |
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| Product | VWA containing CoxE family protein |
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| Protein accession | YP_001327164 |
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| Protein GI | 150396697 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3552] Protein containing von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.735993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0167248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCG CCAATTCGGG TGAGACCAAC TCTTCTGCAT CCCGCGAAGG ACAGGGACGG
CTTGCCGACA ATATCGTCTT CTTCGCCCGC GCGCTGAGGC GCGCCGGATT GCGGATCGGC
CCCGCCGCCG TCGCTGACGC GATCGATGCG GTCAGGCTGA TCGGAATCGG TTCCCGTGGC
GAATTCTATG CGGCGCTCCA ATGCACCTTC GTCAAGCGCC ATGAAGACCA GGCCGTGTTC
GACGAAGCGT TCCGGCTCTT CTGGCGCTCT CCGGACCTTG TGAACAAGAT GATCGCGCTC
ATGTCGCCCA TTGCCTTGCC TCGCTCCGGG GAGGACCGGC GTCGGCGTGC CGGCGAAGCA
CGCATGCGTG ATGCGCTCCT TGCCGGTCGG CACGGTGCAC AGCAGCCGAG CAAGGCGCCG
GAGGTCGAGG TCGATGCACG CTATACCGTT TCGGGGCGCG AACTCTTGCG CAAAGCGGAT
TTCGGCCAGA TGACCGCCGA GGAGATCGCC GAGGCAAGAA GGGCCTTGTC CTCGATCCTG
CTGCCGCTGG ACCGGATACG CACGCGCCGC TATCGCCCCT CCCGCCGTCC AGTGCGAATC
GACCCGCGCG CCACCATGCG CGACGCGATG CGGCTTGGAG GGGATTTCAT CCTGCCGCGA
TTTCGCGAGC CACGCTTCGT TCATCCGCCA TTGGTCGTGC TTGCCGATAT CTCTGGATCG
ATGAGCCAGT ACACAAAAAT ATTCCTGCAT TTTCTGCACG CGCTGACGGA ACAGCGGCAG
CGTGTGCAGA CGTTTCTTTT CGGAACGCGG CTGACGAATG TCACGAGGCA GATGCGCAAC
CGCGACCCTG ACGAGGCGCT GGACGAGTGC ATTGCCGCGG TCAAGGATTG GTCGGGCGGC
ACGCGTATCG GAGAGACGCT GCACGCGTTC AATCGGCGCT GGTCGCGGCG GGTATTAGGA
CAGGGCGCAG TCGTGCTGCT GATGACCGAT GGGCTGGAGC GCGATGACAC AGCGGGTCTG
GAGGCTGAAC TGGGCCGACT GCATCGATCC TGCCGCCGGC TCGTCTGGCT TAATCCGCTG
CTGCGCTTCG ACGGTTTCGA GGCGCGCGCG AGAGGCGTGA GGGCCATGTT GCCACACGTT
GACGAGTTCC GGCCTATACA CAATCTCGAA TCGGTCTCCG ACCTGGTGAA ATCGCTGTCC
GGCCAGGGAG GACGCGATGC CGACCCACGG CGTTTCCTCA ACCATGGACG GCTTGCCGTT
GACCGAGCGC CGGCGAATGC GCCACAGTGA
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| Protein sequence | MTGANSGETN SSASREGQGR LADNIVFFAR ALRRAGLRIG PAAVADAIDA VRLIGIGSRG
EFYAALQCTF VKRHEDQAVF DEAFRLFWRS PDLVNKMIAL MSPIALPRSG EDRRRRAGEA
RMRDALLAGR HGAQQPSKAP EVEVDARYTV SGRELLRKAD FGQMTAEEIA EARRALSSIL
LPLDRIRTRR YRPSRRPVRI DPRATMRDAM RLGGDFILPR FREPRFVHPP LVVLADISGS
MSQYTKIFLH FLHALTEQRQ RVQTFLFGTR LTNVTRQMRN RDPDEALDEC IAAVKDWSGG
TRIGETLHAF NRRWSRRVLG QGAVVLLMTD GLERDDTAGL EAELGRLHRS CRRLVWLNPL
LRFDGFEARA RGVRAMLPHV DEFRPIHNLE SVSDLVKSLS GQGGRDADPR RFLNHGRLAV
DRAPANAPQ
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