Gene Smed_1483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1483 
Symbol 
ID5322341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1569468 
End bp1569800 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content65% 
IMG OID640790431 
Producthypothetical protein 
Protein accessionYP_001327163 
Protein GI150396696 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0215592 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACG AGCCGAACAT CCTCGATCCA TTGGCGGTCG CTGAAACCTG GCACGAGCAA 
GGTCGTGCCG TGGCGCTCGC GACCGTGATC GAAACCTGGG GCTCGGCGCC CCGTCCCGTC
GGCAGCCATC TGGTAATCGA CGGGGAAGGC AATTTCCAAG GCTCCGTTTC CGGCGGCTGC
GTCGAGGGCG CGGTCATCGC GGAGGCTGCC GACGTGATTA CGTCCGGTAC CCCGCGGCTT
CTCGAATTCG GCGTAGCCGA CGAAACCGCA TGGCGTGTCG GCCTGTCCTG CGGTGGCCGG
ATCCGTGTCT ATGTCGAACG AATTGACGGC TGA
 
Protein sequence
MQNEPNILDP LAVAETWHEQ GRAVALATVI ETWGSAPRPV GSHLVIDGEG NFQGSVSGGC 
VEGAVIAEAA DVITSGTPRL LEFGVADETA WRVGLSCGGR IRVYVERIDG