| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1480 |
|---|
| Symbol | |
|---|
| ID | 5322338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 1566823 |
|---|
| End bp | 1567140 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640790428 |
|---|
| Product | TfoX domain-containing protein |
|---|
| Protein accession | YP_001327160 |
|---|
| Protein GI | 150396693 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3070] Regulator of competence-specific genes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.322278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.00610766 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATAATG CGGCAATCGA GGAGATGTTC GAAACACTTG GCCCGGTCAA GATCCGCCGC
ATGTTCGGCG GCAAGGGCAT CTATGTCGAC GGCATCATCC TTGCACTGGA GGTGAACGGC
GAGATTCTTC TGAAGGGGGA TGCAGAAACG GCGCAGGCGT TCGAGGAAGC GGGCGCGCGC
CAATGGACCT ACGAAGGCAA GGGCAAGCGG GTGAAAATGC CCTATTGGAG TACGCCCGAA
GCGGCCTGGG ACGATCCGGA CGACATGGCC CGCTGGGTGA GACTTGCCTA CGAGGCCGCG
CTCAGGTCGA AGAAGTGA
|
|---|
| Protein sequence | MDNAAIEEMF ETLGPVKIRR MFGGKGIYVD GIILALEVNG EILLKGDAET AQAFEEAGAR
QWTYEGKGKR VKMPYWSTPE AAWDDPDDMA RWVRLAYEAA LRSKK
|
|---|
| |