Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1479 |
Symbol | |
ID | 5322337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1566368 |
End bp | 1566775 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640790427 |
Product | NUDIX hydrolase |
Protein accession | YP_001327159 |
Protein GI | 150396692 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.142432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00620383 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCACTGC CCGGTGTTGA CTTCCCCGGT CTCGGCTGTG GTCTGGCGAT TGTAAGGGAT GGAAAAATCC TCCTCTGTCG TCGCCTGAAG GCGCCGGAGG CCCGCCACTG GAGCATTGTC GGCGGCAAAG TCGACCAGAT GGAGCGTGCG CAGGACGCGG CACGGCGTGA AGCGCAGGAG GAAAGCGGTC TTTCCATCCA TTCGATCCGC TTTCTGTGCA TCAGCGAACA GTTGATCGAG GCCGAGCGGC AGCATTGGGT CTCGCTGATC TATGTGACGG AGGACTTCTC CGGCGAGCCG CGCCTCACTG AGCCGGACAA GCTTTCCGAC ATTCGCTGGT TCGACCTGAC CGCCCTGCCC CAGCCCCTAT CCCGCTTTGC TGCCGACGCA ATTCGCGCGC TCGCCTGA
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Protein sequence | MALPGVDFPG LGCGLAIVRD GKILLCRRLK APEARHWSIV GGKVDQMERA QDAARREAQE ESGLSIHSIR FLCISEQLIE AERQHWVSLI YVTEDFSGEP RLTEPDKLSD IRWFDLTALP QPLSRFAADA IRALA
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