Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1476 |
Symbol | |
ID | 5322334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1562364 |
End bp | 1563191 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640790424 |
Product | hypothetical protein |
Protein accession | YP_001327156 |
Protein GI | 150396689 |
COG category | [S] Function unknown |
COG ID | [COG2833] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.444109 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0249969 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAACC TTCCGCAATT CCACAGCCTG CGCGGCGCGG CTGTCGAAGC GATCCGCGCC GCCGACCTTA GCGTCAAGAC CGAGCTCGCT CAGGAAGCGT CGCGGCGCTG GCAGGCGCGA AAGCTGTCCT TGCGCTCTCC CCTGGACCGC GCCGTGCCCG AGCGGCCGGG CCGCCCGGAA AAGCCCGTTC TGACACCCCC GACTCAGGTC AAGCGGCGCT CGCTCGGTTC GCTGAAGGGA CGTGTCGCCT TGCTTCACGC CATTGCTCAT ATTGAACTGA ACGCCGTAGA TCTGGCTCTC GACATCGTCG CACGCTTTGC GTCCGAACCG GTGCCGAATT CCTTCTTTGA CGGCTGGATG CAGGTCGCCT TCGAGGAAGC CAAACATTTT CGAATGGTTC GGCAAAGACT GAACGATCTG GGGGCCGACT ATGGCGACCT TCCCGCACAT GACGGCCTTT GGCAGGCGGC GCATGACACG CGCAACGACC TGACCGCCCG CCTCGCCGTC GTGCCGCTCA TTCTAGAGGC CCGCGGTCTC GATGTGACAC CCGCATTGCG CGCGAAAATG CGAGAGACCG GCGACAACGA GAGCGCCGCT GTGCTCGACG TGATCTATGA GGACGAGAAG GGCCATGTCG CAATCGGAGC GAAATGGTTC CGCTTTCTTT GCGCCCGGCA AAGGAAGGAC CCGGCCGTCG CCTTTCAAAC CCTCGTGCGG GCAAACTTCC GCGGCCCGCT GAAGCCCCCC TTCAACGACA TTGCCCGCGC CGAGGCGGGG TTGACCCCCT CGTTTTATCG GTCAATGACT GCCGCCACCA ACATCTGA
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Protein sequence | MANLPQFHSL RGAAVEAIRA ADLSVKTELA QEASRRWQAR KLSLRSPLDR AVPERPGRPE KPVLTPPTQV KRRSLGSLKG RVALLHAIAH IELNAVDLAL DIVARFASEP VPNSFFDGWM QVAFEEAKHF RMVRQRLNDL GADYGDLPAH DGLWQAAHDT RNDLTARLAV VPLILEARGL DVTPALRAKM RETGDNESAA VLDVIYEDEK GHVAIGAKWF RFLCARQRKD PAVAFQTLVR ANFRGPLKPP FNDIARAEAG LTPSFYRSMT AATNI
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