Gene Smed_1472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1472 
SymbolanmK 
ID5322330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1555466 
End bp1556614 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content61% 
IMG OID640790420 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_001327152 
Protein GI150396685 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0207251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0378204 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAGA CAGTAACGGC GATCGGCCTG ATGAGTGGCA CGAGCATGGA CGGCATAGAC 
GTGGCGCTTT TGCGAACGGA TGGCGAGACA ATCGTCGATC GCGGCCCGTC TGCCGGGTAT
ACCTATGATC CTGCGTTCCG GGCGCGCCTT AAGACGGGTC TCGACGATGC GCGATCGATT
GTCAAACGAG AGGAGCGTCC GGGAACGCTG GCTGACCTCG AACATGAACT GACCCTCAGA
CACGCAGATG CTGTTCGAGG ATTCCTACAT CAAAACAACA TACTGTCAGA AAGTGTTGAT
GTAGTAGGTT TTCACGGGCA GACTGTCCTG CATCGGCCTG ATGAGGCACT GACGGTGCAG
CTTGGCGACG GCGATCTCCT GGCCCAGGAA ACCGGGATCG ATGTCGTCTA TGATATGCGG
GCAAATGACA TGGCCCATGG AGGTCAGGGC GCACCACTCA TTCCGGCCTA TCACGCCGCC
CTTGCGCACG AACTCTCAAA AAACGGTGAA ATCGTTGCGC CCGCCGTATT CGTCAATATC
GGCGGCATTT CCAATCTCAC TTTTATTGGC TGGAGGGATG AAATCGTCGC CTATGACAGT
GGCCCCGGCA ACACGCTGAT CGATCAGTGG GTGGAGGCGC ATGCCGGCAT TCCCTTCGAT
CAGGGCGGCA TGATCGCGAG CGAGGGCAGC GTGATGCGGG AACTCGCAGA GAGCTATCTT
TCCCATCCCT TTTTCAGCGC AGAGAAACGC CGCTCGCTCG ACCGGAACGA CTTCGCGCCG
CCCTCCGGCG AAGCGGCGAG CCTCGAAGAT GGAGCGCGCA CCCTGGCGCA TGTGACGGCC
GCCGCAATCA TCCGGTCCGC GCAGCACCTT CCGGCACGCC CCGAGACTTA CATTGTCTGT
GGCGGCGGGC GCCTTAATCC CGTGATCATG CGCGACCTTC ATATGCTAGC CGAAGCGGAG
GGAGCGCGCG TGGTCGCAGC GGAAGCGCTG CGTCTGAATG GAGACTCCAT GGAGGCGGAG
GCCTGGGCCT ATCTCGCGGT GAGATCGCGA TGCGGCTTGC CTTTGACTTA CCCCGGGACG
ACCGGCGTCA GCCGTCCTGT CAGCGGAGGA CGGCTGGCAC GGAAGCCGTC GAGAGCGGAA
ACCGCTTAA
 
Protein sequence
MGKTVTAIGL MSGTSMDGID VALLRTDGET IVDRGPSAGY TYDPAFRARL KTGLDDARSI 
VKREERPGTL ADLEHELTLR HADAVRGFLH QNNILSESVD VVGFHGQTVL HRPDEALTVQ
LGDGDLLAQE TGIDVVYDMR ANDMAHGGQG APLIPAYHAA LAHELSKNGE IVAPAVFVNI
GGISNLTFIG WRDEIVAYDS GPGNTLIDQW VEAHAGIPFD QGGMIASEGS VMRELAESYL
SHPFFSAEKR RSLDRNDFAP PSGEAASLED GARTLAHVTA AAIIRSAQHL PARPETYIVC
GGGRLNPVIM RDLHMLAEAE GARVVAAEAL RLNGDSMEAE AWAYLAVRSR CGLPLTYPGT
TGVSRPVSGG RLARKPSRAE TA