| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1471 |
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| Symbol | |
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| ID | 5322329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1554179 |
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| End bp | 1555375 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790419 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001327151 |
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| Protein GI | 150396684 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0238873 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGGTG CAATTTCACT TCTGGCAGTG AATTTCGTCA TTGCCCAGAT ATTCGTGGCG
GCCTTTCTCG TCATTGCGGT AAAAAGCCGG CACGGCCGGG CCGCCGCCTG GTGCGCCGCT
GGATTCGCCA TAGCCTCTCT GGCTGCGATT TGCGAAGCCG TCCTGCCGTT TACACCGGTG
CCCAAATTTT TTGCCGTCGG GGCCTTTGCA AGTGTCCTTG CCGGTTTCTG CCTGCTGCGT
TTTGGCCTGG GACTCTTTTA TGGGGTGCCG GCAAAACCAG CGGCGCTTGC GGCTTTCCTG
ATCGTTTCGG TGGTAGTCGA TCTGTTGATT TACGACCTTC CGCGCGGAAC GCTGCAGCAC
GCCTTCTTCT ATCAAATGCC CTTCTTCCTC ATTCAGGCCT GGACCGCGGC CGCGATCATG
CGTTCCCCGC GCCGTTCCTA TGCAGACAGG ATTCTCGTTG GACTCCTGGT GCTGAATGCT
CTTCATTTCC TCGGGAAGGT TTATGCCGCG ATAGCCGCGG GGGCGGGCTC CACGGCATCC
GACTATCTTC AGAGCCCATT CGCCTTGATC TCGCAGGCGC TCGGCGCCGC GTTGATCGTC
GGGACTGGTG TGGCGATCCT CGGCGTCATG GTCAAGGATA TCGTCGACGC GGCCCGCGCC
AGCTCCGAGA TCGACTCCCT CTCGGGCCTC TGGAACCGGC GCGGCTTCAT CGAGCGCGTC
GCGCCCTGGT TGCTGAGCCG CAACGCCAAG AGCCCCGGCG CGTTGATCCT TACGGACCTC
GACCGGTTCA AGGGCGTCAA CGACACCTAT GGCCATCATA CCGGCGATGA GGTCATTCGG
CAGTTCGCGC GTGTGCTTCT CGACCTGATC CCCAGCCGCG CCGCGGCGGC ACGCCTGGGC
GGCGAGGAGT TTGCCGTTTT CCTCCCCGGC GTCGACCTGG CCGATGCACG AGTGGTTGCC
CAAGGAATGC GAGCCGCGAT CGCCTCGACG CCGATTGCCG ACCTTCCGGA GACGGCCACG
ATTACCGCAA GTTTCGGCGT TGCGGCGATA GCTCCGGGAG AGTCACTGGA AATGGCGCTG
CAAAGGGCGG ATAAGGCGCT TTATGTGGCC AAGGCCGCCG GGCGAAACCG TGTCGAATGT
GCCGAGCCGA CGGCCCGCGT CGTCACACCG GTTGTCTCCC AGTGGATGAG GCAATAG
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| Protein sequence | MGGAISLLAV NFVIAQIFVA AFLVIAVKSR HGRAAAWCAA GFAIASLAAI CEAVLPFTPV
PKFFAVGAFA SVLAGFCLLR FGLGLFYGVP AKPAALAAFL IVSVVVDLLI YDLPRGTLQH
AFFYQMPFFL IQAWTAAAIM RSPRRSYADR ILVGLLVLNA LHFLGKVYAA IAAGAGSTAS
DYLQSPFALI SQALGAALIV GTGVAILGVM VKDIVDAARA SSEIDSLSGL WNRRGFIERV
APWLLSRNAK SPGALILTDL DRFKGVNDTY GHHTGDEVIR QFARVLLDLI PSRAAAARLG
GEEFAVFLPG VDLADARVVA QGMRAAIAST PIADLPETAT ITASFGVAAI APGESLEMAL
QRADKALYVA KAAGRNRVEC AEPTARVVTP VVSQWMRQ
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