| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1456 |
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| Symbol | |
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| ID | 5322314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1537766 |
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| End bp | 1539601 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640790404 |
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| Product | poly(R)-hydroxyalkanoic acid synthase, class I |
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| Protein accession | YP_001327136 |
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| Protein GI | 150396669 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.547793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00312344 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACAGCAG AGAAGGCCGA GGGCGCTAAG GGCTTTGCCG GCTTCGACCC GAAATCGGTC
GAGCCCTACA TCGTCAAGGA CCCCGAAAAC CTGGCCATCA ACATGGCTCG CGCGGCCGAG
CAGCTAGGAA AAGCTGCTTC CGCCTGGCTT GCGCCCCGCG AATCCGGAGA AAAGACGGAT
AGCTTCGCCG AGCCGGTCTC CGATATGGTC AAAACGCTTT CCAAAGTCTC GGAATACTGG
CTCACAGACC CACGGCGGAC ACTCGAAGCC CAGACTCATC TTCTCGGCAG TTTCTTCGAT
ATGTGGTCCC GGACGGTCCA CCGGATGGCG GGCGACGCAG TCGACGAGCC GGCCAGCCTT
CAGCGCAACG ACAAGCGCTT CTCCGACGAA GACTGGGTGA GGAATCCCTT TTTCGATTTC
ATACGTCAGG CCTATTTCGT TACGTCGGAC TGGGCGGAGC GCATGGTGAA CGACGCCGAG
GGCCTCGACG ACCATACCCG GCACAAGGCC GCCTTCTATG TTCGCCAGAT TGCCAGCGCC
CTTTCCCCGA CCAACTTCAT CACCACCAAC CCGCAGCTAT ATCGCGAAAC AGTGGCGACC
AGCGGCGCCA ATCTCGTGAA GGGCATGCAG ATGCTGGCGG AGGACATCGC CGCCGGCCGC
GGCGAGCTTC GCCTGCGGCA GACTGACACA AGCAAGTTCG CCATCGGCGA AAACATCGCG
GTTACGCCGG GAAAAGTCAT CGCGCAGAAC GATATTTGCC AGGTGCTGCA ATACGAGGCC
AGCACCGAAA CCGTACTCAA GCGGCCGTTG CTCATTTGCC CGCCCTGGAT CAACAAATTC
TACGTGTTGG ATCTCAACCC CGAGAAATCC TTCATCAAAT GGGCGGTCGA CCAGGGCCAC
ACGGTCTTCG TCATTTCCTG GGTGAACCCT GACGAGCGCC ATGCAACGAA GGACTGGGAA
GCCTATGCGC GCGATGGCAT CGGCTTCGCG CTGGACATCA TCGAACAGGC AACCGAAGAG
CGCGAAGTCA ATTCCATCGG CTATTGCGTC GGCGGCACGC TGCTCGCCGC CACCCTGGCG
CTGCATGCCG CGGAAAGGGA TGACCGCATT CGCTCCGCGA CGCTCTTCAC CACCCAGGTG
GATTTCACCC ATGCGGGCGA TCTGAAGGTC TTCGTGGACG ACGACCAGAT CCGCCACCTC
GAGGCCAATA TGAGCGCCAC CGGATATCTG GAAGGCTCGA AGATGGCGTC CGCCTTCAAC
ATGCTGAGGG CCTCGGAGCT GATCTGGCCT TATTTCGTCA ATAATTATCT CAAGGGTCAG
GATCCCCTGC CCTTCGACCT GCTCTACTGG AATTCCGACT CGACACGGAT GCCCGCGGCC
AACCACTCCT TCTATCTCCG CAATTGCTAT CTGGAGAACA GGCTTGCCAA AGGCGAGATG
GTGCTTGCCG GTCGTCGGAT ATCCCTCGGC GACGTCAAGA TCCCCGTCTA CAATCTCGCG
ACGAAGGAGG ATCACATCGC GCCGGCAAAA TCGGTGTTTC TCGGAAGCAG CAGCTTCGGC
GGCAAGGTGA CGTTCGTGCT CTCCGGCTCG GGGCACATCG CGGGTGTGGT CAACCCCCCG
GCTCGCGGCA AGTATCAATA CTGGACGGGA GGGCCGCCCA AGGGCGACGT CGAAACCTGG
ATGAGCAAGG CAAAGGAAAC GGCCGGCTCC TGGTGGCCGC ATTGGCAAAG CTGGGTCGAA
CGGCTCGACA AACGCCGTGT TCCGGCCCGC AAGGCCGGGG GTCCGCTCAA TTCGATCGAG
GAAGCTCCGG GCTCCTACGT GCGTATGCGC GCCTGA
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| Protein sequence | MTAEKAEGAK GFAGFDPKSV EPYIVKDPEN LAINMARAAE QLGKAASAWL APRESGEKTD
SFAEPVSDMV KTLSKVSEYW LTDPRRTLEA QTHLLGSFFD MWSRTVHRMA GDAVDEPASL
QRNDKRFSDE DWVRNPFFDF IRQAYFVTSD WAERMVNDAE GLDDHTRHKA AFYVRQIASA
LSPTNFITTN PQLYRETVAT SGANLVKGMQ MLAEDIAAGR GELRLRQTDT SKFAIGENIA
VTPGKVIAQN DICQVLQYEA STETVLKRPL LICPPWINKF YVLDLNPEKS FIKWAVDQGH
TVFVISWVNP DERHATKDWE AYARDGIGFA LDIIEQATEE REVNSIGYCV GGTLLAATLA
LHAAERDDRI RSATLFTTQV DFTHAGDLKV FVDDDQIRHL EANMSATGYL EGSKMASAFN
MLRASELIWP YFVNNYLKGQ DPLPFDLLYW NSDSTRMPAA NHSFYLRNCY LENRLAKGEM
VLAGRRISLG DVKIPVYNLA TKEDHIAPAK SVFLGSSSFG GKVTFVLSGS GHIAGVVNPP
ARGKYQYWTG GPPKGDVETW MSKAKETAGS WWPHWQSWVE RLDKRRVPAR KAGGPLNSIE
EAPGSYVRMR A
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