| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1454 |
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| Symbol | |
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| ID | 5322312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1536009 |
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| End bp | 1537226 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640790402 |
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| Product | aminotransferase |
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| Protein accession | YP_001327134 |
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| Protein GI | 150396667 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.309418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000434542 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAGAGT TTCATAAAGT CCGGCGTTTG CCGCCTTATG TTTTCGAACA GGTCAACCGT
TTGAAAGCTA GCGCGCGAGC GGCCGGTGCT GACATCATCG ACCTCGGTAT GGGCAATCCG
GATCTTCCCA CCCCGCAATC CATTGTCGAC AAGCTCTGCG AGGTCGTACA GGACCCGCGG
ACGCATCGTT ATTCGTCATC GAAGGGCATT CCGGGTCTGC GACGGGCCCA GGCCGCCTAT
TATGCACGTC GGTTCGGTGT CAAGCTCAAT CCGGAGACGC AGGTCGTCGC GACCCTCGGC
TCCAAGGAAG GCTTCGCCAA CATGGCGCAG GCCATAACCG CACCCGGCGA CGTCATCCTC
TGCCCAAATC CGACCTATCC CATCCACGCA TTCGGGTTCC TGATGGCGGG AGGCGTCATC
CGTTCGATTT CAGTCGAGCC GGACGAGTCC TTTTTTCCTC CGCTGGAGCG CGCCGTACGG
CATTCTATTC CGAAGCCTCT GGCTCTGGTT CTCAACTATC CCTCCAATCC CACGGCGCAG
GTCGCCACGC TCGACTTCTA CAAGGACGTC GTCGCCTTTG CGAAGAAACA CGATATCATC
GTGCTCTCGG ACCTCGCCTA CTCGGAAATC TACTTCAATG ACGCGCCGCC GCCCTCGGTT
CTGGAAGTTC CCGGTGCGAC CGATGTGACT GTCGAATTCA CGTCGATGTC GAAGACCTTT
TCCATGCCGG GCTGGCGCAT GGGCTTCGCT GTCGGCAATG AGCGACTGAT CGCGGCGCTG
ACGCGGGTCA AGTCCTATCT GGACTACGGC GCTTTCACGC CGATTCAGGT GGCGGCGACG
CAGGCGCTGA ACGGTGACGG CAGCGATATA GCCGAGGTGC GCTCCATCTA CAAACGGCGC
CGTGACGTCA TGGTGGAGAG CTTCGGCAAA GCAGGTTTCG AAGTGCCGCC GCCGCCGGCG
ACGATGTTCG CCTGGGCAAA GATCCCCGAG AAGTTCCGTC ATCTCGGCTC GCTCGAGTTT
TCCAAGCTTC TCGTCGAGAA GGCGGATGTC GCGGTCGCGC CCGGCATCGG CTTCGGCGAG
CAGGGCGACG ACTATGTCCG TCTCGCACTC GTGGAAAACG AGCACCGGAT CCGCCAGGCC
GCGCGTAACA TAAAGCGCTT CCTGTCCTCG GCCGACGAGA CGATGCACAA CGTCATCTCG
CTCAACGCAC ATCGGTAG
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| Protein sequence | MEEFHKVRRL PPYVFEQVNR LKASARAAGA DIIDLGMGNP DLPTPQSIVD KLCEVVQDPR
THRYSSSKGI PGLRRAQAAY YARRFGVKLN PETQVVATLG SKEGFANMAQ AITAPGDVIL
CPNPTYPIHA FGFLMAGGVI RSISVEPDES FFPPLERAVR HSIPKPLALV LNYPSNPTAQ
VATLDFYKDV VAFAKKHDII VLSDLAYSEI YFNDAPPPSV LEVPGATDVT VEFTSMSKTF
SMPGWRMGFA VGNERLIAAL TRVKSYLDYG AFTPIQVAAT QALNGDGSDI AEVRSIYKRR
RDVMVESFGK AGFEVPPPPA TMFAWAKIPE KFRHLGSLEF SKLLVEKADV AVAPGIGFGE
QGDDYVRLAL VENEHRIRQA ARNIKRFLSS ADETMHNVIS LNAHR
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