| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1453 |
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| Symbol | |
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| ID | 5322311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1534608 |
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| End bp | 1535930 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640790401 |
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| Product | homoserine dehydrogenase |
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| Protein accession | YP_001327133 |
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| Protein GI | 150396666 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0771081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000482851 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGATG CCCTCAAAAT CGGCATTGCG GGCTTGGGGA CAGTCGGTGC CTCGCTCGTG
CGGATCCTCC AGGATCGTCA TGAGACACTG GCGACTACAT GTGGAAGGGC GATCGAGATT
ACGGCCGTAA CGGCAAGGGA CAGATCAAAG GATCGGGGCG TGGATCTTGC CGGCATCACC
TGGTTCGACG ACGCGGTTTC TCTGGCGTCG CAAGGAGGCA TAGACGTCTT TGTCGAACTG
ATGGGCGGCA CCGGAGATCC GGCCTATGCC TCGGTCAAGG CGGCGCTCAC GCACGGCGTC
CATGTGGTGA CCGCCAACAA GGCACTTCTG GCGGCACACG GAATCGAGCT GGCGGAAATC
GCCGAGAAGC ATGGTGCGCT TCTGAACTAT GAAGCGGCTG TCGCCGGTGG CATTCCCGTC
ATCAAGGCGC TTCGCGAATC GATGACCGGG AACACGATTT CGCGCGTCTA CGGGATCATG
AACGGCACAT GCAATTACAT CCTGACGAAG ATGGAGAAAG AGGGTCTCTC CTTCGAGGCC
TGCCTCAAGG AAGCTCAGCG TCTGGGCTAT GCCGAAGCCG ATCCGGCCTT CGACATCGAA
GGCAACGACA CCGCGCATAA ACTCTCTATC CTGACGAGCC TTGCCTTCGG TACCGCAATC
GCTGCCGACG ATATCTACCT TGAGGGCATT ACCAACATCT CGATCGAGGA CATCCAGGCG
GCCGCCGATC TCGGTTACCG CATCAAGCTT CTCGGGGTCG CCCAGCGTAC CGAAAGCGGT
ATCGAGCAGC GCGTACACCC GACCATGGTC CCACATGACA CCGTCATCGC GCAGGTCGAT
GGGGTGACAA ATGCCGTGGC GATCGAATCC GATATTCTCG GCGAACTCCT GATGGTCGGC
CCCGGCGCCG GAGGGGATGC CACCGCATCG GCAGTGCTTG GCGATATCGC GGATATCGCG
AAAAGCCGCC CCGGCGCGCA GCACGTTCCG GCATTCGGCC GCCCTGCGAA CGCGCTTCTT
CCCTATAAGC GCGCCCGAAT GCAGAGCCAC GAGGGCGGAT ACTTCATCCG GCTCAAAGTG
GTCGACCGCA CCGGAGTCTT CGCCAATGTC GCGAAGCAGA TGGCGGACAA CGACATTTCG
CTCGAATCTA TCATGCAGCA TTCCAAGCAC TATGCCGATC CTGCCGAGCC GAAGACGATC
ATCCTCGTTA CGCATGCGAC CTTTGAGGCT TCCGTGCGCA AAGCGATCGT CTCGATCAAG
GCCGAGGGAT ACCTTGTCGG GGAACCGCAG GTGATTCGGA TCGAGCGTCC GAAGGCTTGG
TAG
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| Protein sequence | MADALKIGIA GLGTVGASLV RILQDRHETL ATTCGRAIEI TAVTARDRSK DRGVDLAGIT
WFDDAVSLAS QGGIDVFVEL MGGTGDPAYA SVKAALTHGV HVVTANKALL AAHGIELAEI
AEKHGALLNY EAAVAGGIPV IKALRESMTG NTISRVYGIM NGTCNYILTK MEKEGLSFEA
CLKEAQRLGY AEADPAFDIE GNDTAHKLSI LTSLAFGTAI AADDIYLEGI TNISIEDIQA
AADLGYRIKL LGVAQRTESG IEQRVHPTMV PHDTVIAQVD GVTNAVAIES DILGELLMVG
PGAGGDATAS AVLGDIADIA KSRPGAQHVP AFGRPANALL PYKRARMQSH EGGYFIRLKV
VDRTGVFANV AKQMADNDIS LESIMQHSKH YADPAEPKTI ILVTHATFEA SVRKAIVSIK
AEGYLVGEPQ VIRIERPKAW
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