| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1440 |
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| Symbol | |
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| ID | 5322292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1520970 |
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| End bp | 1521818 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640790383 |
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| Product | regulatory protein IclR |
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| Protein accession | YP_001327121 |
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| Protein GI | 150396654 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.21696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00000381695 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACGACG TCGCCATCAG GGACATGACC GGCTCCCAAA GCGTCGATCG GGCGACGAAG
CTGTTATCGC TGGTCGGACG ACAGGCGGAC GGCATGACCC TCAGCGCCGT GGTCGAGAAG
AGCGGGCTCA ACAAACCCAC GGTGCGTCGC CTGCTGCTGG CCCTGATCAG GGCCGGCCTT
CTGGAGCAGG ACGACCGCGA CCGGCGCTAC TATATCGGCG AAGAAGCCTA TGTGCTTGGA
ACGCTCGCAT CGGGCCGGCA CGGGCTGCTG CGCCTTTCGA CGGAAAGCCT GCATCGCCTT
GCTCAAAAGA CCAGCGACTC CTGCTTTCTT TCCGTGCGCC GCGGAGCGTC CTCGGTCTGT
CTCCACCGGG AGGAGGGGAG CTTTCCAATT CGCACCCACG CACTCCAGGC GGGCTCCGTG
CATCCTCTGG GAGTCGGCGC CGGCTCTCTT GCCATGCTGT CAGCCCTGCC GGACGAGGAG
GTTTCAGCCG TGCTGGAGCA GAATGCCGCC GTGCTCGAGA ACCAGTTTCC GATGCTTGCT
CCCGACGAAC TGCGCCGGCG CGTCGAACTT ACCCGCATCC AGGGCTATGC GGTCAATCCG
GGCCTTATCC TGGCCAATTC CTGGGGGGTG GGCGTCGCGA TCCGCTATCC GGACGGCGGC
GTGGCTGGAG CCGTCAGCAT TGCCGCCATA GACAGCCGCA TGCAGGAGCC GCGACAGAGC
GAGCTGGCGG TCCTTCTCAG ACAGGAAGCA TCACGCATCG AGATCAAGCT CGCCGAGCAG
TTCCGCGACA GGCGGACGCG ACACATTGCA GCCGTTGCAA GACCTCTCAA AAGGAGATCG
CCCAGATGA
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| Protein sequence | MDDVAIRDMT GSQSVDRATK LLSLVGRQAD GMTLSAVVEK SGLNKPTVRR LLLALIRAGL
LEQDDRDRRY YIGEEAYVLG TLASGRHGLL RLSTESLHRL AQKTSDSCFL SVRRGASSVC
LHREEGSFPI RTHALQAGSV HPLGVGAGSL AMLSALPDEE VSAVLEQNAA VLENQFPMLA
PDELRRRVEL TRIQGYAVNP GLILANSWGV GVAIRYPDGG VAGAVSIAAI DSRMQEPRQS
ELAVLLRQEA SRIEIKLAEQ FRDRRTRHIA AVARPLKRRS PR
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