| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1438 |
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| Symbol | |
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| ID | 5322290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1518158 |
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| End bp | 1519807 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790381 |
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| Product | acyl-CoA synthetase |
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| Protein accession | YP_001327119 |
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| Protein GI | 150396652 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.603543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000173613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACGAGCG ACGAACCGCA GGGCGGCGTC ACCCCGGTTT CGACGCGTGT CATGAACCTC
GCAAACCTGC TTTCGCAGGC GGCAAGACGA AATCCCGACG AGATTGCGCT CATTCGCGGC
GACGTTCAGT GGCAGTGGCG GGAGATTGAG GAACGCGTCG ACGCCATGGC ATACGCCTTC
GTCCACGAAT TCGGGGTGCG GAAAGGCGAC CGTATTCTCG TCCACTCCGC GAACTGCAAT
CAGATGTTCG AATCCATGTT CGCGGTTTTC AGGGTGGGGG CGATCTGGGT GCCCACAAAT
TTCCGGCAAA TGCCGGAGGA AGTCGCCTAT CTGGCGCAGT CGAGCGGTGC CCGAATGGTG
ATTTTCCAGG CCGCCTTTGA CGCGCACGCC GAGGCGTGCC GCGCTACGGG CGAGAGGATC
GAATCGTTCG TTTCGATCGG TTCATCGCCG ATCGGCGAGG ACTATGACGC AATCGTTGCG
CGCAATCTCG GACGGGGCGT TTCGCCGGCT GCCGTCGACC GCGACGACCC ATGCTGGTAC
TTCTACACCT CGGGCACGAC CGGCCGGCCA AAGGCCGCCG TGCTGACGCA CGGGCAAATG
GCCTTTGTCG TCAACAACCA TATCGGCGAT CTTTTTCCGG CGACGACGCA TCGCGACAAG
TCCATCGTCG TCGCGCCGCT GTCCCACGGT GCCGGCGTGC ATCAGCTCTG TCAGGTCGCG
CGAGGTGCGA CGACCATTCT TCTCCCGTCC GAAAAACTGG ACATCCCGCA ATTCTGGACT
CTCGTCGAAA AATGGAGGGT GAACAATCTC TTCGCCGTCC CGACCATCGT GAAGCTGCTC
GTCGAAGACC CGTCGGTCGA CCGGTACGAC CATTCGTCGC TACGCTATGT CATTTATGCG
GGTGCGCCGA TGTATCGCGC CGACCAGCAG ACGGCGCTCG AGAAACTCGG CGCTGTCCTG
GTGCAATATT TCGGCCTCGG CGAAGTAACC GGAGCGATCA CAGTCCTGCC TCCCGCCTTC
CACAGTCTCG GAGACGGCCC GGATGCGCGA ATTGGTACCT GCGGCTTCGA ACGGACGGGC
ATGCAGGTGC AGATCCAGGA CGAAAACGGA GACGAGGTCG CGGCGGGTTG TAGCGGCGAA
ATCTGCGTGA TCGGCCCGGC GGTTTTTGCC GGCTACTATC GGAATCCCGA GGCGAACGCG
AAAGCGTTTC GCAATGGCTG GTTTCGAACC GGTGACCTCG GTCATGTCGA TACGCAGGGC
TTCCTCTACA TCACCGGTCG CGCTTCCGAC ATGTTCATCT CCGGCGGATC CAACGTCTAT
CCGCGCGAAA TCGAGGAGAA GCTTCTCATG CATCCGGATA TCAGCGAAGC GGCGATCGTC
GGTGTTCCCG ATCCGGTATG GGGGGAGGTC GGCGTCGCGG TTTGCGTCGC TCGCGACGGG
GCGACACTCG ATGCGGCGGG CTTGAGAGAA TGGCTGGACG GGAAAGTCGC CCGTTACAAG
CTACCGAAGA AGATCGTCTT CTGGCCCGAA ATGCCGAAGT CGGCCTATGG CAAAATCGCC
AAGAAGATGA TCCGCGAGGA GCTTGAGCGG CGCGGGGAGC TGAATGACCT TTCGCCTGGC
GGCGCGGAGA GCCGGAGTGT CGCCCCGTGA
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| Protein sequence | MTSDEPQGGV TPVSTRVMNL ANLLSQAARR NPDEIALIRG DVQWQWREIE ERVDAMAYAF
VHEFGVRKGD RILVHSANCN QMFESMFAVF RVGAIWVPTN FRQMPEEVAY LAQSSGARMV
IFQAAFDAHA EACRATGERI ESFVSIGSSP IGEDYDAIVA RNLGRGVSPA AVDRDDPCWY
FYTSGTTGRP KAAVLTHGQM AFVVNNHIGD LFPATTHRDK SIVVAPLSHG AGVHQLCQVA
RGATTILLPS EKLDIPQFWT LVEKWRVNNL FAVPTIVKLL VEDPSVDRYD HSSLRYVIYA
GAPMYRADQQ TALEKLGAVL VQYFGLGEVT GAITVLPPAF HSLGDGPDAR IGTCGFERTG
MQVQIQDENG DEVAAGCSGE ICVIGPAVFA GYYRNPEANA KAFRNGWFRT GDLGHVDTQG
FLYITGRASD MFISGGSNVY PREIEEKLLM HPDISEAAIV GVPDPVWGEV GVAVCVARDG
ATLDAAGLRE WLDGKVARYK LPKKIVFWPE MPKSAYGKIA KKMIREELER RGELNDLSPG
GAESRSVAP
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