| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1407 |
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| Symbol | |
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| ID | 5322258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1487958 |
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| End bp | 1489850 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640790349 |
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| Product | putative peptidyl-prolyl cis-trans isomerase protein |
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| Protein accession | YP_001327088 |
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| Protein GI | 150396621 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.73953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.556351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACT CCCTGAGAAA CGCCGCCCAG ACCCGGGTCG TCAAAGCCCT GCTGGCCCTT
CTCATCCTCT CATTTATGGT GTGGGGTGGT CAGACGTTGA TGGTGCCAAA CACGCCCAAT
GCGGTGGTTA CCGTCGGCGA CATCAAGGTG TCGCCGAGCG ACTTCCGGCT GGCCTACGAG
CGGCAGGTGG CTTTGCTTTC GAGACAGCTC GGTACGCCGC TGACGCGTCA GCAGGCGCAA
GCCTTCGGGG TTGAAAACCA GGTCTATGCC CAACTGGTGG CAGGCGCGGC ACTCGACCAG
CTCGCCACCG ACATGAATCT CGGCCTGTCC GAGGACAGGC TGGCGCGGCT GATCGGCGAA
GACCCGGCCT TCCACGGCGT CAACGGCCAA TTCGATCGGC TGACATTCTC CAGCGTTCTG
CGCAATGCGG GGCTGACGGA GCAGGACTAC ATTAACAACC GCAGCCAGGT TGCGGTTCGC
TCGCAGATCG TCGATGCGCT CACGGACGGC TACACGGCGC CGAAGGTGTT GGTGGAGGCC
GTCGACAAGT ATCGCCACGA GACGCGCACG GTCGACTATC TCCTGCTCTC CAACGCAAAT
ATCGACGCGG TCAAGACGCC GGGGGATGAT GTACTCGCTC CGTGGTTCGA AAGCCGCAAG
GCGAATTACC GAGCTCCCGA ATACCGCAAG TTCAGCTACA TCAAACTCGA GCCGGAGGAC
CTCGCCGCGT CCGATTCCGT GACGGAGGAA GAGCTCCGCG CCGATTACGA CAAGCGCAAG
GAAAGCTTCC GCACGCCGGC AACGAGAACG GTCGAACAGC TCGCCTTCCC GTCGCGAGAG
GCAGCCGACG CCGCGGCCGC AAAGCTTTCC GCCGGAACGT CCTTCGACGA TCTGGTCAAG
GCCGAAGGCA AGACGTCGGC GGACGTTCTG CTCGGCGACT TCACCAAGGA GCGCATGCCT
GACGCAAAGA TTGCCGATGC AGCCTTTGCC GTTGCTCAGG ACGGCGGCAC CACGCCCGTG
GTCGACGGCC CATTCGGCCC GGTCATCCTG CGCGTGACCA ATATTCGGTC GGAAGCCGTT
CGAAGCTATG ATGAAGTGAA GGAAGAACTG CGCAAGGAGA TCGCTCTCGA CGCGGCGCGC
GATCAGCTCG TCGGTCTTCA CGACAAGATC GAAGACGAAC GTGCCGGCGG CGTGACCGTC
AAGGAGATTG CCGAACAGCT GAAGCTCAAG CTTGTCACTG TCGTTGCGGT AGACGCTTCC
GGCAAGGATC AGAACGGCGA TGATGTGAAG GACCTGCCGG AACCGCGGGC TCTTCTCCAG
GAAGTCTTCA AGGCCGACGT GGGCACAGAT ACGCTCTCGG TCAATATCGG GCGCGACGGC
TCCGTCTGGT TCGATGTCGA GGAGATCATC CCGGGCCGCG ACCGGACTCT CGACGAGGTG
CGCGACGAAG TGGCGGCCGA CTGGACCGCG GAGCAGCAGC GTGCGGCGCT TGCGGCAAAG
GCGAAGGAAC TCAAGGAGCG CGTGGAAAAG GGCGCCAAGC TCGCCGATAT CGCGAGCGAA
CTTGGCCTCG TGGTCGAGAC CAAGACCGGG CTGACCCGCT CGACGAACGA TGCGACGCTC
AGTCCTGCTG CGGTGATCGC GGCCTTCGGA GGCGCGAACG GCCACGTTGC CAATGCTCCG
GGGATTGGCG GCGACGGCCA GGTGCTCATG CAGGTCACGG CAGTCGAGGA GAAAGCGCCT
GCCGACGCCC TCGACAATGA CAGCCGTCAG ATCGAAGCGA TTGCGCGGGC GAGCGGCGAC
GACATCCTGG ATCAGATGGT CTCGACACTG CAAACCGCCT ATGGCGTCTC GATCAACCAG
ACGCTTGCCG AAACGGCGCT GGCGCAACGG TGA
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| Protein sequence | MLDSLRNAAQ TRVVKALLAL LILSFMVWGG QTLMVPNTPN AVVTVGDIKV SPSDFRLAYE
RQVALLSRQL GTPLTRQQAQ AFGVENQVYA QLVAGAALDQ LATDMNLGLS EDRLARLIGE
DPAFHGVNGQ FDRLTFSSVL RNAGLTEQDY INNRSQVAVR SQIVDALTDG YTAPKVLVEA
VDKYRHETRT VDYLLLSNAN IDAVKTPGDD VLAPWFESRK ANYRAPEYRK FSYIKLEPED
LAASDSVTEE ELRADYDKRK ESFRTPATRT VEQLAFPSRE AADAAAAKLS AGTSFDDLVK
AEGKTSADVL LGDFTKERMP DAKIADAAFA VAQDGGTTPV VDGPFGPVIL RVTNIRSEAV
RSYDEVKEEL RKEIALDAAR DQLVGLHDKI EDERAGGVTV KEIAEQLKLK LVTVVAVDAS
GKDQNGDDVK DLPEPRALLQ EVFKADVGTD TLSVNIGRDG SVWFDVEEII PGRDRTLDEV
RDEVAADWTA EQQRAALAAK AKELKERVEK GAKLADIASE LGLVVETKTG LTRSTNDATL
SPAAVIAAFG GANGHVANAP GIGGDGQVLM QVTAVEEKAP ADALDNDSRQ IEAIARASGD
DILDQMVSTL QTAYGVSINQ TLAETALAQR
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