Gene Smed_1405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1405 
SymbolglmU 
ID5322256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1484423 
End bp1485793 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content64% 
IMG OID640790347 
Productbifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 
Protein accessionYP_001327086 
Protein GI150396619 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 
TIGRFAM ID[TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.139178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGGA CTTGCCTGGC GATCATCCTG GCAGCTGGCG AGAGCACGCG GATGAAATCC 
GCCATGTCGA AGGTGCTGCA CCCCGTCGCG GGGCGGGCAA TGATCAGCCA CGTCGTGGAT
GCCCTGGCGA GTGCATCGAT CTCCGATGTG GCGCTGGTCG TCGGACGCGA CGCGGAAGCG
GTGGCCGCCG CCGCGAATAC AGGCGACGTC GCGGTCACCG CCCTTCTCCA GAAGGAACGG
CTGGGGACCG CTCACGCAGT GCTTGCCGCG CGCGAGGCAA TCGCGAAAGG CTATGATGAC
ATCCTGGTCG TTTTCGGGGA CACGCCACTG ATCACCGCCG CGCCCCTCGA GGCGGCGCGT
GACGGTCTTG CCGCCGGAAA CGACGTCGTC GTGATCGGCT TTCAGGCCGC GGATCCAACC
GGATACGGGC GCCTCATCGT TGAAGGTGAT GCACTCGTCG CCATTCGCGA ACACAGGGAC
GCCTCCGAGG AGGAACGCCG TATCACCTAT TGCAATGGCG GACTCATGGC AATCGACGGC
CGCAAGGCTC TCGATCTGCT GGATCGCGTC GGCAATACCA ATGCCAAGGG CGAGTACTAC
CTCACCGATC TCGTCGAGAT CGTCCGGTCC CTCGGCGGCC GAGCGATCGC CGTCGAAGCG
CCCGAAGAGG AACTTACCGG CTGCAACACC CGCGCCGAAC TTGCTTATAT CGAGCGCCTC
TGGCAACAGC GTCGGCGTCA CGAACTGATG CTGGCCGGCG TCTCGATGGT CGCACCCGAG
ACCGTGTTCC TTTCCTGGGA TACGGCGCTT GCGCAGGACG TTCTCGTGGA ACCGAACGTC
GTCTTCGGAC CTGGCGTGCG CGTGGAAAGC GGCGCGATCA TCCACGCCTT CTCCCATCTC
GAGGGCGCAC ACGTCCGCGC CGGGGCAGCG GTCGGGCCCT TTGCACGCCT GCGCACAGGT
GCCGACCTCG GAGCGAACTC GAAAGTCGGC AATTTCTGCG AGGTGAAGAA GGCAGAGATC
GGGGCCGGGG CCAAGGTCAG CCATCTTACC TATATCGGTG ACGCCTTTGT CGGCGCCGGC
ACGAATATCG GGGCCGGAAC AATCACCTGC AACTATGATG GCGTGAACAA GCACGTCACG
CGCATTGGCG CGAACGCCTT TATCGGTTCC AATTCGGCGC TGGTCGCTCC GGTCTCGATC
GGCGACGGGG CACTCATCGC ATCCGGAAGC GTGATTACGG AAGACGTACC GGCGGACGCC
GTTGCTTTTG GCCGTGCACG CCAGGAGGTG AAGCCGGGCA GGGCACCGAT CTTGCGCGAA
CGCTACAAGG CTGAAAAGCT GGCACGAAAG ATCGCCAAGG CCGCGGAGTA G
 
Protein sequence
MERTCLAIIL AAGESTRMKS AMSKVLHPVA GRAMISHVVD ALASASISDV ALVVGRDAEA 
VAAAANTGDV AVTALLQKER LGTAHAVLAA REAIAKGYDD ILVVFGDTPL ITAAPLEAAR
DGLAAGNDVV VIGFQAADPT GYGRLIVEGD ALVAIREHRD ASEEERRITY CNGGLMAIDG
RKALDLLDRV GNTNAKGEYY LTDLVEIVRS LGGRAIAVEA PEEELTGCNT RAELAYIERL
WQQRRRHELM LAGVSMVAPE TVFLSWDTAL AQDVLVEPNV VFGPGVRVES GAIIHAFSHL
EGAHVRAGAA VGPFARLRTG ADLGANSKVG NFCEVKKAEI GAGAKVSHLT YIGDAFVGAG
TNIGAGTITC NYDGVNKHVT RIGANAFIGS NSALVAPVSI GDGALIASGS VITEDVPADA
VAFGRARQEV KPGRAPILRE RYKAEKLARK IAKAAE