| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1404 |
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| Symbol | |
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| ID | 5322255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1482419 |
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| End bp | 1484245 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640790346 |
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| Product | glucosamine--fructose-6-phosphate aminotransferase |
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| Protein accession | YP_001327085 |
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| Protein GI | 150396618 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
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| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.247017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGGGA TTGTTGGTAT CGTTGGACAT CAGCCGGTTT CGGAGCGGCT GGTCGAAGCC
TTGAAGCGTC TGGAATATCG CGGCTATGAT TCGGCCGGCG TCGCGACGAT CGAGGCGGGA
ACGTTGCAGC GCCGTCGGGC CGAGGGCAAG CTGGTCAATC TCGAGAACAG GTTGAAAGAG
CAGCCGCTGG CCGGCACCAT CGGCATCGCA CACACCCGCT GGGCGACCCA CGGGGCGCCT
ACGGAACGGA ACGCCCATCC GCATTTCACC CGGGGCGTGG CGGTCGTACA CAACGGCATC
ATCGAGAACT TCGCCGAACT CAAGGACGAA CTGGCCGCGG CAGGAGCCCA GTTCCAGACG
GAAACCGACA CGGAGGTCGT CGCGCATCTC CTGGAGAAGT TCCGCCGTGA TGGACTGGGG
CGGCGCGAAG CCATGCTTGC CATGCTGAAG CGCATCAAGG GCGCCTACGC CTTCGCCATT
CTCTTCGAGG ACGACCCATC GACCATCATG GCCGCACGCA ACGGTCCGCC GCTGGCGATC
GGCCACGGCA ACGGCGAGAT GTTCCTGGGC TCGGACGCGA TCGCGCTTGC TCCCTTTACC
AATGAGATCA CCTATCTGAT CGATGGCGAC TGGGCGGTCA TCGGCAAGAC CGGCGTTCAT
ATCTTCGATT TCGACGGCAA TACGGTCGAA CGTCCGCGCC AGATTTCCAC CACCGCTGCC
TTTCTGGTCG ACAAGGGCAA CCATCGGCAC TTCATGGAGA AGGAGATCTA CGAACAGCCG
GAGGTCATCG CCCATGCTCT GGGCCATTAT GTGAACTTCA TAGAAAACCG CGTTGTTCCG
ATTTCCGACG GTATCGATTT CGCCAAGGTC CCGAGCTTGG CGATCTCGGC CTGCGGCACC
GCTTATCTTG CCGGCCTGAT CGGAAAATAC TGGTTCGAAC GCTATGCGCG CCTGCCTGTC
GAAATCGATG TCGCATCCGA ATTCCGCTAT CGCGATATAC CTCTGTCGCC GCAGTCGGCA
GCCCTTTTCA TCTCGCAGTC GGGCGAAACC GCCGACACCC TGGCATCTCT GAGATATTGC
AAGGAGCACG GCCTCAAGAT CGGCGCTGTG GTCAATACCC GCGAGTCGAC CATCGCGCGC
GAGTCCGACG CGGTCTTCCC AATCCTTGCC GGCCCGGAGA TCGGCGTCGC CTCGACCAAG
GCCTTCACCT GCCAGCTTGC AGTTCTTGCC GCACTCGCAG TCGGCGCCGG CAGAGCTCGT
GGGACCGTGA GCGCGGAGGA GGAGCAGGCG CTCGTAAAGA GCCTTTCCGA GATGCCGCGG
ATCATGGGCC AGGTGCTGAA CAGTATCCAG CCCGCAATCG AGACGCTGTC GCGGGAACTG
TCGAAATGCA GCGACGTGCT CTATCTCGGA CGCGGTACCA GCTTTCCACT GGCAATGGAG
GGGGCGCTGA AGCTTAAGGA GATCTCGTAT ATCCACGCCG AGGGTTATGC CGCGGGCGAG
CTGAAGCACG GACCGATCGC CCTTATCGAC GAAAACATGC CCGTCATCGT CATTGCGCCG
CATGACCGCT TCTTCGACAA GACGGTATCG AATATGCAGG AGGTGGCAGC ACGTGGCGGC
CGGATCATCC TCATAACCGA CGAGAGAGGA GCAGCCGCCT CGAAACTCGA CACGATGCAC
ACGATCGTGC TGCCGTTCGT CGACGAGATC ATCGCACCGA TGATCTTCTC GCTGCCGGTC
CAGCTTCTCG CCTACCACAC CGCCGTCATC ATGGGGACCG ACGTCGACCA GCCGCGCAAC
CTCGCCAAAT CGGTGACGGT CGAATGA
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| Protein sequence | MCGIVGIVGH QPVSERLVEA LKRLEYRGYD SAGVATIEAG TLQRRRAEGK LVNLENRLKE
QPLAGTIGIA HTRWATHGAP TERNAHPHFT RGVAVVHNGI IENFAELKDE LAAAGAQFQT
ETDTEVVAHL LEKFRRDGLG RREAMLAMLK RIKGAYAFAI LFEDDPSTIM AARNGPPLAI
GHGNGEMFLG SDAIALAPFT NEITYLIDGD WAVIGKTGVH IFDFDGNTVE RPRQISTTAA
FLVDKGNHRH FMEKEIYEQP EVIAHALGHY VNFIENRVVP ISDGIDFAKV PSLAISACGT
AYLAGLIGKY WFERYARLPV EIDVASEFRY RDIPLSPQSA ALFISQSGET ADTLASLRYC
KEHGLKIGAV VNTRESTIAR ESDAVFPILA GPEIGVASTK AFTCQLAVLA ALAVGAGRAR
GTVSAEEEQA LVKSLSEMPR IMGQVLNSIQ PAIETLSREL SKCSDVLYLG RGTSFPLAME
GALKLKEISY IHAEGYAAGE LKHGPIALID ENMPVIVIAP HDRFFDKTVS NMQEVAARGG
RIILITDERG AAASKLDTMH TIVLPFVDEI IAPMIFSLPV QLLAYHTAVI MGTDVDQPRN
LAKSVTVE
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