Gene Smed_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1400 
Symbol 
ID5322251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1478664 
End bp1478975 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content62% 
IMG OID640790342 
Producthypothetical protein 
Protein accessionYP_001327081 
Protein GI150396614 
COG category[S] Function unknown 
COG ID[COG2938] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCA TTTCGCGCAC GAGCGCCGAT CTCGACCCGC GTCGGCGCAG GATTCTTTTC 
CGCGCATGGC ACCGTGGCAT CAGGGAAATG GACCTGATCC TCGGCCAGTT CGCGGAGGCG
GAGCTCGCGA CCTTGTCCGA AGCGGAGCTC GACGAGCTCG AAGCGATCAT GGGCGAGGAG
GACAACGACC TCGTCCGCTG GATCACTGGA GAAAAACCGC TGCCCGAGCG TTATGCGACC
GAGCTTTTTC TCCGGATTGC TGCCTATCGC CCTGATTTCG ACCCGGTTCG CCAAGACACG
AAGCAGACAT GA
 
Protein sequence
MTGISRTSAD LDPRRRRILF RAWHRGIREM DLILGQFAEA ELATLSEAEL DELEAIMGEE 
DNDLVRWITG EKPLPERYAT ELFLRIAAYR PDFDPVRQDT KQT