| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1396 |
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| Symbol | |
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| ID | 5322247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1471600 |
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| End bp | 1472229 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640790338 |
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| Product | invasion associated locus B family protein |
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| Protein accession | YP_001327077 |
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| Protein GI | 150396610 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5342] Invasion protein B, involved in pathogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.213972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTTCA AGTCGAACTT CACCACACGC GCGGGATTGG CAGCGCTGGC GCTTTCGTTC
GCAGCCGCCG GCGCGCCGAG CGTCGCTTCC GCGCAGCAGG CGGGAGGCAA GCCGCCGCAG
GGTTGGTTCA AGGTCTGCAC CAAGCAGGAA GATAACGATG TCTGCATCGT CCAGAACCTG
CTCACCGCCA ATAACGGACA GCTTGTTACG GCAGTCGGAC TCATTTCCGT CTCGGGCAAG
GTAAACCGCA AGGTCATGCA GGTTTCGGTG CCGTCGGCGC GCATGATTCC GCCAGGCATC
CAATTGCAGA TCGACGGTGG TAAGGGCGTC AAGCTCGACT ACGCGATCTG CATGCCCGAC
AAGTGCGTTG CCGAGGCGCC ACTCTCCGAC GCGCTTATCG CGCAGTTGAA GAAGGGCAAT
GAGGTCGTCT TCACCTCCGT CAACTTTCAG CGCGCTCCAA ACCCGATCAA GATGACGCTC
GAAGGCTTCA CTGGCGTTTT CGACGGCGAA CCGATCGAAC AGTCCCAGCT CGAAGAGCGC
CAGCGCCTGC TGCAGGAAGA GATGCAGAAG AAGGCCGAAG ACGCCCGCAA AAAGCTGGAA
GAGGCGCAGA AAGCTGCCAA GCAGCAGTAA
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| Protein sequence | MIFKSNFTTR AGLAALALSF AAAGAPSVAS AQQAGGKPPQ GWFKVCTKQE DNDVCIVQNL
LTANNGQLVT AVGLISVSGK VNRKVMQVSV PSARMIPPGI QLQIDGGKGV KLDYAICMPD
KCVAEAPLSD ALIAQLKKGN EVVFTSVNFQ RAPNPIKMTL EGFTGVFDGE PIEQSQLEER
QRLLQEEMQK KAEDARKKLE EAQKAAKQQ
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