Gene Smed_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1388 
Symbol 
ID5322239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1463770 
End bp1464108 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content57% 
IMG OID640790330 
Productnitrogen regulatory protein P-II 
Protein accessionYP_001327069 
Protein GI150396602 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.258506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.939142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA TCGAAGCGAT CATTAAGCCT TTCAAGCTCG ACGAAGTGAA GGAAGCCCTT 
CAGGAGGTCG GCTTGCAGGG GATTACCGTC ACGGAAGCCA AGGGCTTCGG GCGGCAGAAA
GGTCATACGG AGCTTTACCG GGGTGCAGAA TACGTCGTGG ACTTCCTGCC GAAGGTGAAG
GTCGAGGTTG TGCTGGCCGA TGAGAATGCG GAGGCCGTGA TCGAAGCCAT CCGTAACGCC
GCACAAACCG GCCGGATCGG CGACGGCAAG ATATTCGTAT CCAACGTGGA AGAGGTCATC
CGCATCCGCA CCGGTGAAAC CGGAATCGAC GCCATCTGA
 
Protein sequence
MKKIEAIIKP FKLDEVKEAL QEVGLQGITV TEAKGFGRQK GHTELYRGAE YVVDFLPKVK 
VEVVLADENA EAVIEAIRNA AQTGRIGDGK IFVSNVEEVI RIRTGETGID AI