| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1387 |
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| Symbol | |
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| ID | 5322238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1461949 |
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| End bp | 1463421 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640790329 |
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| Product | carbohydrate kinase, YjeF related protein |
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| Protein accession | YP_001327068 |
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| Protein GI | 150396601 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.470651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAGA CACTTTCAAA TATCTTTGTG ACTCCGGCCG AAATGACATC GGTCGACAAG
GATGCCGCCC ATTCGGGAAT CGACAGCTTC TCGCTCATGC GTTCAGCCGG AACGGCCGTG
TCGGCCGCCG CCTTGCGACT TTACCCGGGA GCCCTGCGGT TCGTGACGCT TTGCGGCCCC
GGCAACAACG GTGGCGATGG CTATGTCGCC GCAGCCGCGC TGGCGGAAAG CGGCGCATGC
GTCACGGTGT TCGCGCTTGG CGAGCCGGCG AAGTTGAAGG GCGATGCCGC AAGGGCGCGC
GAACGGTGCG CGCTCGCGCC TGGACCGCTC GACGGTTACG AGCCGCAACC GGGCGACGTC
GTTATCGATG CGCTTTTCGG GGCAGGGCTT GCGCGTGAGG TGCCCAAGCA GGCGAGAAAC
GTCATCGGCC GGGTGAACGC CAGTGGAGTA CCGGTAGTCG CCGTCGACCT GCCATCCGGC
ATAGACGGGC GGACGGGTGA GATCCGTGGC GCAAGCTTCG TTGCGGCCCA CACCGTAACG
TTCATGGCTC CAAAGCCCGG CCATCTGCTG ATGCCGGGTC GCGCCCGTTG CGGCACAATC
GAAGTCTTCG ATATCGGCAT CCCGGGGAGG TTCGTTGTCG GCAGGGCCGG TGATTTGCAC
ATCAACACCC CCACGCTCTG GGAAGAGCAC CTCGGCGCGC TCGATCCGGA GGCCCATAAA
TACAAGCGCG GTCATCTCGC AGTATTTTGC GGCGGATCGG CCTCGACCGG GGCCGCGCGA
TTGTCGGCGG CAGCCGGCCT GCGCGCTGGT GCCGGGCTCG TGACGCTTGC CTCTCCAGTG
GAAGCGCTCG CTACGAACGC GTCGCATCTC ACGGCCGTCA TGCTCAAGGA GATCGACGGC
ACAGCCGACC TTAGCGCCTG GCTCAAGGAC AAGCGGCTGA GCACTTTCGT TCTTGGCCCC
GGTTTCGGGG TTGGCAAGAC GGCACGGGAC TTCGTGCTCA TGCTTTGCGA CCGGGCGCTG
GTCCTCGATG CCGACGGCAT CACTTCGTTC AAAGAGGCGG AAGAGCAACT CTTCGACAGG
ATCGCGGAGG AGGGCGGCGA AGTGGTGATG ACGCCGCACG ACGGTGAGTT TGGGCGTATT
TTCCCCGGCA TTGCTGCGGA TACGGCTTTG TCAAAGATCG AGAAGGCACA GGCGGCAGCA
AAACTCAGTC ATTCCGTGAT CGTCTACAAG GGCCCGGATA CCGTCATTGC CGCGCCTTCC
GGCCGGGCGG CCGTCAATGT CAATGCGCCC CCCTGGCTTG CGACGGCAGG CTCCGGCGAC
GTGCTTGCCG GGATCATCGG AGCGCACCTG GCACAGGGCA TGCCTTCATT CGAGGCAGCG
GCGGCGGCAG TCTGGCGCCA CGGCGAAGCA GGTGTCGCAG CTGGCCGTAC GGCGACGGCC
GAAATGCTCA TCGAAAGCAT GCCGCCGCTT TGA
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| Protein sequence | MSQTLSNIFV TPAEMTSVDK DAAHSGIDSF SLMRSAGTAV SAAALRLYPG ALRFVTLCGP
GNNGGDGYVA AAALAESGAC VTVFALGEPA KLKGDAARAR ERCALAPGPL DGYEPQPGDV
VIDALFGAGL AREVPKQARN VIGRVNASGV PVVAVDLPSG IDGRTGEIRG ASFVAAHTVT
FMAPKPGHLL MPGRARCGTI EVFDIGIPGR FVVGRAGDLH INTPTLWEEH LGALDPEAHK
YKRGHLAVFC GGSASTGAAR LSAAAGLRAG AGLVTLASPV EALATNASHL TAVMLKEIDG
TADLSAWLKD KRLSTFVLGP GFGVGKTARD FVLMLCDRAL VLDADGITSF KEAEEQLFDR
IAEEGGEVVM TPHDGEFGRI FPGIAADTAL SKIEKAQAAA KLSHSVIVYK GPDTVIAAPS
GRAAVNVNAP PWLATAGSGD VLAGIIGAHL AQGMPSFEAA AAAVWRHGEA GVAAGRTATA
EMLIESMPPL
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