Gene Smed_1386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1386 
Symbol 
ID5322237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1461420 
End bp1461917 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content59% 
IMG OID640790328 
Productxanthine-guanine phosphoribosyltransferase 
Protein accessionYP_001327067 
Protein GI150396600 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.205195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTTC CCGAGAAAGC CTTTCCCGTA TCCTGGGATC AATTCCATCG CGACGCCCGC 
GCTCTGGCCT GGCGGCTAGC GGATAACGGA CAGGAATGGC GCGCGATGGT TTGCATCACG
CGCGGCGGCC TTGTTCCGGC CGCGATCGTA AGCCGGGAAC TTAACATCCG GATGATCGAA
ACGGTCTGCA TCGCCTCCTA TCACGACTAC GATACGCAAG GTCAGATGAA GGTGCTGAAG
AGCATCTCAC CGGAGATCGC CAAGAGCGGC GGCGAAGGCG TTCTCATCGT CGACGATTTG
ACAGACACCG GCAAAACCGC CGCCGAGGTT CGCGCGATGC TGCCAAAGGC GCATTTCGCC
GCCGTCTACG CAAAGCCGAA AGGGCGTCCG CTGGTCGATA CTTTCGTTAC CGAGGTCAGC
CAGGATACTT GGATCTACTT CCCTTGGGAT CTGGGCTTCA CCTACCAGGA GCCTATCGCC
AAGGGCACAC GCGGTTAG
 
Protein sequence
MSLPEKAFPV SWDQFHRDAR ALAWRLADNG QEWRAMVCIT RGGLVPAAIV SRELNIRMIE 
TVCIASYHDY DTQGQMKVLK SISPEIAKSG GEGVLIVDDL TDTGKTAAEV RAMLPKAHFA
AVYAKPKGRP LVDTFVTEVS QDTWIYFPWD LGFTYQEPIA KGTRG