Gene Smed_1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1379 
Symbol 
ID5322230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1457567 
End bp1457956 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content59% 
IMG OID640790321 
ProductDGPFAETKE family protein 
Protein accessionYP_001327060 
Protein GI150396593 
COG category[S] Function unknown 
COG ID[COG3795] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.606248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTACG CGATATTGGC TTATCACGAG GAAGAGATCG TCGAATCCTG GACCAGGGAA 
GCTGACGCAG AGTTGATGGA CGAGTTGCTG CAAGTTAATG ACCGCCTCGT CCGCGCGAAG
CGTTTGGGCC CCGCCGCACG GCTCGGCTCG ACAAAGAGCG CTGTGACGTT GCGCGGAGAG
GGCGCCGGCA TGGTCATCGA CGGTCCCTTT GCCGAAACAA AGGAACAGTT GCTCGGGCTC
TACGTCGTGG ATTGCCCAAG CATTGAAGCC GCCGTCGAGA CTGCGCGTGA GCTGCGGCGC
GTCAATCCAA CCGCAGTGTA TGAAATCAGA CCGATTTCTC TCTATCTGCC CGGTGCTACG
CTTTCGGCAC CTGCCGACGA TCCAGCTTGA
 
Protein sequence
MFYAILAYHE EEIVESWTRE ADAELMDELL QVNDRLVRAK RLGPAARLGS TKSAVTLRGE 
GAGMVIDGPF AETKEQLLGL YVVDCPSIEA AVETARELRR VNPTAVYEIR PISLYLPGAT
LSAPADDPA