Gene Smed_1368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1368 
Symbol 
ID5322219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1448206 
End bp1449324 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content64% 
IMG OID640790311 
Productalanine dehydrogenase 
Protein accessionYP_001327051 
Protein GI150396584 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0686] Alanine dehydrogenase 
TIGRFAM ID[TIGR00518] alanine dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGTCG GTTGCCCGAA GGAAATCAAA AACCATGAAT ACCGTGTCGG CCTGACGCCC 
GGATCAGTAC GGGAATACGT CGCCCATGGC CACGAGGTCA TCGTGGAAAG CAAAGCTGGG
GCGGGAATCG GGGCGGATGA CGACTCCTAT CGCGCGGCAG GCGCAAGGAT CGTGCCGGCA
GCCAGGGACG TCTTCGAGAA GGCGGACATG GTCGTCAAGG TCAAGGAGCC GCAGCCCTCC
GAATGGGCGC AGCTTCGCGA AGGCCAGATC CTCTATACCT ATCTTCATCT CGCACCGGAT
CCCGAACAGA CGCAGGGGCT CCTCAAGTCC GGCGTCACCG CCATCGCCTA TGAAACCGTA
ACGGATGAGC GCGGCGGGTT GCCGCTGCTT GCTCCCATGT CCGAGGTCGC GGGACGGCTT
GCAATTCAGG CAGGGGCCAC CTCCCTGCAA AAGGCAAATG GCGGCCGCGG AATCCTGCTC
GGCGGAGTGC CCGGCGTTCT GCCAGCCAAG GTCGCGATCA TCGGCGGCGG CGTTGTCGGC
CTGCATGCCG CCAAGATGGC TGCCGGCCTC GGAGCCGACG TCTCGATCCT CGATCGATCC
CTGCCGCGGC TGCGCCAGCT CGATGACATC TTCAACGGCC GCGTCCATAC ACGCTACTCG
ACGATCGACG CGCTTGAGGA GGAGGTGTTC TCCGCCGACC TGGTGATCGG GGCCGTGCTC
ATTCCGGGCG CGGCTGCGCC GAAGCTCGTC ACGCGCGAAA TGCTGTCCGC GATGAAAAAA
GGCGCTGTCA TTGTCGATGT CGCGATCGAT CAGGGCGGTT GTTTCGAGAC GTCGCATGCG
ACGACGCACT CCGAGCCGAC CTATGAGGTC GACGGCATTG TGCATTATTG CGTCGCGAAC
ATGCCGGGTG CCGTGCCGAT CACGTCGGCT CACGCCCTCA ACAATGCGAC GCTCCATTAC
GGTCTGCAAC TCGCCGATCG CGGCCTCAAG GCCATTGCCG AAGACCGGCA TCTGCGTGCC
GGCCTGAACG TCCACCGCGG CCGCGTGACG AATGTTGCTG TGGCCGAAGC GCTCGGCTAC
GACGCCCATG CGCCCGAGGT CGTCCTCAAC GTCGCCTGA
 
Protein sequence
MRVGCPKEIK NHEYRVGLTP GSVREYVAHG HEVIVESKAG AGIGADDDSY RAAGARIVPA 
ARDVFEKADM VVKVKEPQPS EWAQLREGQI LYTYLHLAPD PEQTQGLLKS GVTAIAYETV
TDERGGLPLL APMSEVAGRL AIQAGATSLQ KANGGRGILL GGVPGVLPAK VAIIGGGVVG
LHAAKMAAGL GADVSILDRS LPRLRQLDDI FNGRVHTRYS TIDALEEEVF SADLVIGAVL
IPGAAAPKLV TREMLSAMKK GAVIVDVAID QGGCFETSHA TTHSEPTYEV DGIVHYCVAN
MPGAVPITSA HALNNATLHY GLQLADRGLK AIAEDRHLRA GLNVHRGRVT NVAVAEALGY
DAHAPEVVLN VA