Gene Smed_1360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1360 
Symbol 
ID5322211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1442494 
End bp1442838 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content59% 
IMG OID640790303 
Productsmall multidrug resistance protein 
Protein accessionYP_001327043 
Protein GI150396576 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.24792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTTG CATGGTTTTT CCTGGTACTC GCGATTGTGA CCGAAGTCGT CGGCCTGACG 
GTAATGAAGG CTGCGTCCGG TTCCGGCACC TATTGGGGGC ATATCATTAT GTATGCCTCG
ATCGCGCTCT CCTACGTCTT CCTGGCACGA GCAGTTAAGG TTATTCCGGT CGGTGTCGCC
TATGCCGTGT GGGAAGGGTC CGGTGTTGCT GTGATAACGC TCGTTTCTGT TTTCGCTTTC
GGCCGCGCCC TCTCCGGCCG TGAGATGCTC GGCCTCGCGA TGGCCGTCGC CGGAATCCTC
CTCGTCAATG CGGGTAAGGG CAAGGGTGAG GAAACAGACG CATGA
 
Protein sequence
MRLAWFFLVL AIVTEVVGLT VMKAASGSGT YWGHIIMYAS IALSYVFLAR AVKVIPVGVA 
YAVWEGSGVA VITLVSVFAF GRALSGREML GLAMAVAGIL LVNAGKGKGE ETDA