| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1336 |
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| Symbol | |
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| ID | 5322184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1422413 |
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| End bp | 1423666 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640790278 |
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| Product | HK97 family phage portal protein |
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| Protein accession | YP_001327021 |
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| Protein GI | 150396554 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4695] Phage-related protein |
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| TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.352989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTCTCA TTGATAGGCT GCTCGGCCGC AAGGCTGAAG AAAAAGCCGT GTCGTTCGAT
CCCGTGTGGC TCGACTGGTT CGGCTCTAGG CAATCGAAGG CAGGTGTTCC CGTAAATTGG
GAGCGCGCGC TGGACGTTTC CACGGTATTC GCGTGTATCC GAGTTATTGC TAACGGCGTT
GCGCAGGTTC CCTTGCGCGT CATGAAGGAA CTGCCTGACG GGAAGGGCGG CACTCCCGCC
ACCGAACACC CGCTGTACGC CGTCCTGAAC CGGCGACCAA ACAAGTGGAT GACGTCTTTC
GAACTCCGAG AGACGCTCAT ATTTCACGCA GCGCTGACCG GCAACGCGTT CTTCTACAAA
AACATGGTAC GTGGCCAGGT CAGGGAACTT ATCCCGATTG ACCCTGGCTG CGTCACGATT
ACGCGGAGCA ACGATTATTC GCTGACCTAC ACGGTAAGCG GCATTGGTGG GCGGTCTATG
GACTTCCCGC AGTCGCTGAT CTGGCACATT CGCGGGCCGT CTTGGGACAC GTGGCGCGGC
TTGGACGCCG TGCAGCAGGC TCGCGAGGCA ATCGGCCTCA CGATCGCGAC GGAGAACACG
CAGGCCGAGC TCCACGCCAA CGGCGCGATG CCCTCCGGTG TGTATTCGAC CGATCAGAAG
ATTGATCCGG AGAAATACAA GCAGATTCAG GCTTGGATTG CGGCTCAGGT AAGCGGCGCC
AACCGGCACA AGCCGTTTGT CATCGACTCG AACTTTAAGT GGACGCCGCA GTCAATGAGC
GGCGTCGACG CACAGCATCT TGAGACGCGA AAATTCCAGA CCGAGCAGCT TTGCCAGTCT
CTTGGCGTGT TTCCGCAGAT GATTGGCCAC GCCGGCCAGG CAATGACGTT TGCGAGCGCA
GAGCAGGTGT TTTTGGCTCA CGTTGTGCAT ACGCTCGGGC CGTGGTGGGA GAGAATCCAG
CAGTCCATAG ACGTCAATTT GCTCGACGGG CCGGAGGATG CCGGTTACTA CGCGAAATTT
AACGCCAACG GACTGCTTAA GGGTGCCCAC AAGGACCGAG CCGAGTTCTA TTCCAAGGCT
CTCGGTACTG GCGGGTCGCC TGCATACATG ACGCCGAACG AGATTCGCGC ACTTGAAGAC
CTGAATCCGA TCGAGGGCGG CGACGAACTG CCGAAGCCGA CGAACGTTGG TGGCGCTCCA
GCGCCAGACA AGCCGAAAGA CGGCGCACAG GATCCTAAAA ATGACGAAAA ATAA
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| Protein sequence | MGLIDRLLGR KAEEKAVSFD PVWLDWFGSR QSKAGVPVNW ERALDVSTVF ACIRVIANGV
AQVPLRVMKE LPDGKGGTPA TEHPLYAVLN RRPNKWMTSF ELRETLIFHA ALTGNAFFYK
NMVRGQVREL IPIDPGCVTI TRSNDYSLTY TVSGIGGRSM DFPQSLIWHI RGPSWDTWRG
LDAVQQAREA IGLTIATENT QAELHANGAM PSGVYSTDQK IDPEKYKQIQ AWIAAQVSGA
NRHKPFVIDS NFKWTPQSMS GVDAQHLETR KFQTEQLCQS LGVFPQMIGH AGQAMTFASA
EQVFLAHVVH TLGPWWERIQ QSIDVNLLDG PEDAGYYAKF NANGLLKGAH KDRAEFYSKA
LGTGGSPAYM TPNEIRALED LNPIEGGDEL PKPTNVGGAP APDKPKDGAQ DPKNDEK
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