| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1334 |
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| Symbol | |
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| ID | 5322182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1420375 |
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| End bp | 1421649 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640790276 |
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| Product | HK97 family phage major capsid protein |
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| Protein accession | YP_001327019 |
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| Protein GI | 150396552 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
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| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.280266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGATT CTGCCATCGA AAAAGTTATG ACTGCGTTTG AGGAATTTAA GTCCACGAAC
GACGCGCGCC TCACGCAAAT TGAGAAGAAG GGCGCTGCTG ATCCAGTGAC TGCCGAGAAG
CTCGGCCGCA TTGAGACTGA CCTTTCCAAA CTGGAGGATA TCAACCAGAA GCTGACCGCC
GCTGCGCTTG AAGCCAAGAA GGAGCGGGAT CACGTCGACG AGCTCGAGGC AAAGCTCAAT
CGACTGTCGC TCGCGGCTGC GAACGACAAC GTCCGACAGG ATGAAGTCAA ATCACGATCA
AACACGTGGG CTCGCGCCGT CGTCGGCGCC ATCACCCGCG GAGAGATGAA TATCTCGGCC
GACCAGCAGA AGGCTCTGGC GGACGTCACC GCCGAATACA AGGCTATGTC GGTCGGCAAC
GATACCACTG GTGGGTACCT TGCGCCGGCA GAATACGTCC GAGAGATCAT CAAGGGCGTC
ACAGAGCTCT CGCCAGTTCG TTCGATGGTC CGCGTCCGCC AGACCTCGTC GAAGGCGATC
ATGATCCCGA AGCGCACTGG TCAATTCTCT GCCAGGTGGA CGGCTGAACA GGCCACTCGC
ACGGAGACTG ACGGTCTCCG CTACGGCATG TGGGAAATTC CGACCCACGA GCTTTACGCT
CTGGTGGACA TCAGCGAGCA GAACCTCGAG GATTCCGCTT TCGATATGGA AGCCGAAATC
CGCCTCGAAG CTGGCGAACA GTTCGCAGTC GCTGAAGGTG CGGCCGTGGT TTCCGGCGAC
GGCAACGGCA AGCCTGAAGG CTGGATGACT GCAAGTGGCG TTGGCGAAAA CAACTCCGGA
TCAGCAACCA CGATTGCTGA TGCCGACGGC CAGGCAAATG GATTGCTGAC GCTGAAGCAT
GCGCTGAAGA CGGCTTATAC CCGCAACGCC GTGTGGGCGC TGAACCGCAC CACACTTGGC
TCTGTGCGAC GCTTGAAGGA CGCTGACAAG GGTTACGTTT GGCAACCTGG CCTTGCGCTC
GGCAAGCCGA ACACAATCGA TGGCGATCCC TACGTCGAGG TTCCTGACAT GCCCAACGAG
GGCGCCGGCG CTTTTCCCAT TGCTTACGGC GACTTCCAGC GTGGCTACAC GCTCGTTGAC
CGCATTCAGA TGTCCATGCT TCGCGATCCT TACACGCAGG CAACCGTCGG CAACATTCGC
TTCATGTTCC GTCGCCGTCT CGGCGGCCAG GTGACGCTTG CCGAAGCGTT CCGCAAGCTG
AAGTGCGCGG CCTAA
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| Protein sequence | MADSAIEKVM TAFEEFKSTN DARLTQIEKK GAADPVTAEK LGRIETDLSK LEDINQKLTA
AALEAKKERD HVDELEAKLN RLSLAAANDN VRQDEVKSRS NTWARAVVGA ITRGEMNISA
DQQKALADVT AEYKAMSVGN DTTGGYLAPA EYVREIIKGV TELSPVRSMV RVRQTSSKAI
MIPKRTGQFS ARWTAEQATR TETDGLRYGM WEIPTHELYA LVDISEQNLE DSAFDMEAEI
RLEAGEQFAV AEGAAVVSGD GNGKPEGWMT ASGVGENNSG SATTIADADG QANGLLTLKH
ALKTAYTRNA VWALNRTTLG SVRRLKDADK GYVWQPGLAL GKPNTIDGDP YVEVPDMPNE
GAGAFPIAYG DFQRGYTLVD RIQMSMLRDP YTQATVGNIR FMFRRRLGGQ VTLAEAFRKL
KCAA
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