Gene Smed_1326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1326 
Symbol 
ID5322174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1415718 
End bp1416200 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content58% 
IMG OID640790268 
ProductHK97 family phage protein 
Protein accessionYP_001327011 
Protein GI150396544 
COG category 
COG ID 
TIGRFAM ID[TIGR01725] phage protein, HK97 gp10 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0053564 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGA AAGTCATCGG ACTAGACAAG CTCAACAGAA AGTTGGCGCT CTTGCCGATT 
GTTGCGCGCA AGCGGATACG TGAGGCGATG CAGCAAGGCG CGGACGAAAT CGTCGCCATG
ATGAAGTCGC TTGTCCCAAC CGATAGCGGC GCCCTTAAAA ACAGCATCGA CTGGACGTGG
GGCTCGGCCC CGAAAGGTGC CTTGACCATC GCAACGGTGC GCGGCCAAGG CATGCGAAAC
ACCGGCAGCG AAAACATCAT CACGATCTAT GCCGGCAATG CTGACGCTTA TTACGCTCGC
TTCGTCGAGT TCGGGACGGC AGCCCATACG GCTGGCGGCA TGTTTGCTGG TGCGGCGATA
CCGGCAATTG CGGCATCGCC ATTCTTCTTT GTTTCGTTCA GGGCGAACCG CAAGCGCGTC
AAGAGCCGCA TCACTCGAGC AGTGAACAAA GCGGCCAAAG AAGTAGCAGC AGGAGGCGGC
TAG
 
Protein sequence
MTAKVIGLDK LNRKLALLPI VARKRIREAM QQGADEIVAM MKSLVPTDSG ALKNSIDWTW 
GSAPKGALTI ATVRGQGMRN TGSENIITIY AGNADAYYAR FVEFGTAAHT AGGMFAGAAI
PAIAASPFFF VSFRANRKRV KSRITRAVNK AAKEVAAGGG