Gene Smed_1324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1324 
Symbol 
ID5322172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1414824 
End bp1415261 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content61% 
IMG OID640790266 
Producthypothetical protein 
Protein accessionYP_001327009 
Protein GI150396542 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00950625 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGC CCGTAACGGC TCGCTTTGGC AAATTCCGCG TGCTGCTCGA CCTCGCTGGC 
ACCGGCACCT ACACCGCACC TTGCGGCTTC ACGTCGAAGT CGCTGACCCT CGCAAAATCC
CTTTCCGAAG TCAGTCTTCC GGATTGCGAC GATCCCGACG CGCCTATCAC CCTAGGCCGT
GACGTCGAAA GCATCTCCGC GTCCGTTACG GGCGAGGGCG TCCTCGCCGC GAACGCGGTC
GAGACCTGGC TCGATGCCTA CGAAAGCACG AATTCCGTTG CTGTGAAGAT CGAGATTGAA
TTCTCGACCG GCACCGTGAC GTGGACTGGC AGCATGCACG TCGAATCGCT GGAGATCGGC
GCAGAGCAGG GCGGCCGAGT TACGCTCAAC GTCTCGATGC AGTCCGACGG CGCGCTGGTT
CGCACGGATA CATTCTAA
 
Protein sequence
MAQPVTARFG KFRVLLDLAG TGTYTAPCGF TSKSLTLAKS LSEVSLPDCD DPDAPITLGR 
DVESISASVT GEGVLAANAV ETWLDAYEST NSVAVKIEIE FSTGTVTWTG SMHVESLEIG
AEQGGRVTLN VSMQSDGALV RTDTF