| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1308 |
|---|
| Symbol | |
|---|
| ID | 5322156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 1400014 |
|---|
| End bp | 1400646 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640790250 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001326993 |
|---|
| Protein GI | 150396526 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.2475 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTGCTTG AGGTACTTCA AGGTTGGCTG ACGGCAATCG CAACTGGTGC TGGTGTTTAC
GTGGCCATTG GCGGGTTGAA TTCCTGGCGA CGAGAGACCA CCGGCAAGCG GGACATCGAG
TTGTGCCAGG CTGTTATAGA ACGGTTCTAC GAGGCAGAGC ACCGAATGGA TGTTCTGCGG
TCGCCCTACT CGTTCGCTTC CGAAGCAGCG AGCCGTCAGA AGGGAGAACA CGAAAGTGAA
GATGAGAGCT ATCGGCTCGA TCTGCTTTTC GTGCCCTTGG CTAGGTTAGA AGCGCAAAGC
GCGTTTTGGT CAGAGCTCTT TTCTTACAAG TTCAGGATGC GTGCGCTGTT TGGAGAAGAG
GCCGCCACGA CATTCAAACA TATCGATGAC GCGTACCGGT CTTTTCGTGC GGCCGCAGTG
ACCAGATACC AAGCGCTGCA TAGGAATCCA GACGGCTTGA GCCCGGAGAC TCAGACTAAA
TTGGAGGAGA GGATTTGGGC AGAGCTTGCA GAGCCCGATG AGATCGCAGT GAAAATGCGC
GAGGCGATAA ATGCGATGGA GCGGGTATGC ATCCCCATCG TTCGTTCCAC AAGGCCAGCC
AAGCGACTGA CCGCATTGTT GAAGCGAAGC TAG
|
|---|
| Protein sequence | MVLEVLQGWL TAIATGAGVY VAIGGLNSWR RETTGKRDIE LCQAVIERFY EAEHRMDVLR
SPYSFASEAA SRQKGEHESE DESYRLDLLF VPLARLEAQS AFWSELFSYK FRMRALFGEE
AATTFKHIDD AYRSFRAAAV TRYQALHRNP DGLSPETQTK LEERIWAELA EPDEIAVKMR
EAINAMERVC IPIVRSTRPA KRLTALLKRS
|
|---|
| |