| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1281 |
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| Symbol | groEL |
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| ID | 5322128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1375786 |
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| End bp | 1377414 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640790222 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_001326966 |
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| Protein GI | 150396499 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.127549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.499917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCGA AAGAAGTCAA ATTTCAAGCC GACGCGCGCG AGCGCATGCT GCGAGGTGTC
GATGTACTTG CCAATGCCGT AAAGGTAACC CTTGGCCCGA AGGGCCGCAA CGTCGTCATC
GACAAATCCT TCGGTGCGCC GCGGATCACT AAGGACGGCG TGTCCGTCGC CAAGGAAATC
GAACTTGAGG ACAAGTTCGA GAATATGGGC GCGCAAATGC TGCGCGAAGT TGCATCCAAG
ACCAACGATC TGGCGGGAGA CGGAACGACG ACCGCCACGG TACTCGCTCA GGCGATCGTT
CGGGAAGGCG CCAAGGCCAT TGCCTCAGGC ATGAACCCGA TGGACCTGAA GCGCGGCATC
GATCTCGCAG TCGATGCGGT CGTGAAAGAA TTGAAGAGCA ACGCCCGGAA AATCTCCCAG
AATTCCGAGA TTGCCCAGGT TGGCACCATT TCCGCCAATG GCGATACCGA GATCGGGCGT
TATCTCGCCG AGGCGATGGA GAAAGTCGGC AATGAAGGGG TGATCACGGT TGAGGAAGCC
AAGACGTCCG ATACGGAGCT CGAGGTCGTC GAGGGCATGC AGTTCGACCG CGGCTATCTC
TCGCCTTACT TCGTCACCAA TCAGGACAAG ATGCGGGTGG AGCTGGAGGA TCCCTATATC
CTCATCCACG AGAAGAAGCT TTCCAATCTG CAGTCGATAC TGCCGGTGCT TGAAGCCGTG
GTCCAATCCG GCAAGCCGCT GCTCATCATC GCCGAGGACG TCGAAGGAGA GGCGCTCGCC
ACCCTCGTCG TCAACAAGCT GCGTGGCGGC CTCAAGGTTG CTGCCGTCAA GGCTCCCGGC
TTCGGCGACC GCCGCAAGGC CATGTTGGAA GACATTGCCA TCCTGACCGG CGGAACCGTG
GTTTCGGAAG ACCTTGGCAT CATGCTGGAA AACGTCACGC TCGAAATGCT CGGCCGGGCC
AAGAAGGTCT CCATCGAGAA GGAGAACACG ACCATCATCG ATGGCGCAGG TTCGAAAACC
GAGATCGAGG GGCGGACCGC ACAAATCCGC GCGCAGATCG AAGAAACCAC CTCGGACTAT
GACCGCGAGA AGCTGCAAGA ACGTCTTGCC AAGCTCGCTG GCGGCGTTGC AGTCATCCGA
GTGGGCGGCT CGACTGAAGT CGAGGTGAAG GAGAAGAAGG ACCGCGTGGA CGACGCCCTG
CATGCGACCC GCGCGGCAGT CGAGGAAGGC ATCCTGCCCG GCGGCGGCAT CGCGCTCCTG
CGGGCCGTCA ATGCTCTTGA CGGTCTCAAG ACCGCCAACG ACGATCAGCG CGTGGGAATC
GAGATCGTGC GCCGCGCGAT TGAAGCTCCC GTCCGCCAGA TTGCCGAAAA TGCCGGAGCG
GAAGGCTCGA TCATCGTCGG CAAACTGCGC GAGAAGGTCG AGTTCTCCTA TGGCTGGAAC
GCCCAGACCA ATGAATATGG TGACCTCTAC ACCATGGGCG TGATCGACCC GGTTAAAGTC
GTCCGCACGG CGCTTCAGGA TGCCGCGTCG GTGGCCGGTC TTCTCGTCAC GACTGAAGCC
ATGATCGCCG AGAAGCCCAA GAAGGAATCG ACGCCGGCGC TTCCGGCCGG CGGCGGCATG
GACTTTTAA
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| Protein sequence | MAAKEVKFQA DARERMLRGV DVLANAVKVT LGPKGRNVVI DKSFGAPRIT KDGVSVAKEI
ELEDKFENMG AQMLREVASK TNDLAGDGTT TATVLAQAIV REGAKAIASG MNPMDLKRGI
DLAVDAVVKE LKSNARKISQ NSEIAQVGTI SANGDTEIGR YLAEAMEKVG NEGVITVEEA
KTSDTELEVV EGMQFDRGYL SPYFVTNQDK MRVELEDPYI LIHEKKLSNL QSILPVLEAV
VQSGKPLLII AEDVEGEALA TLVVNKLRGG LKVAAVKAPG FGDRRKAMLE DIAILTGGTV
VSEDLGIMLE NVTLEMLGRA KKVSIEKENT TIIDGAGSKT EIEGRTAQIR AQIEETTSDY
DREKLQERLA KLAGGVAVIR VGGSTEVEVK EKKDRVDDAL HATRAAVEEG ILPGGGIALL
RAVNALDGLK TANDDQRVGI EIVRRAIEAP VRQIAENAGA EGSIIVGKLR EKVEFSYGWN
AQTNEYGDLY TMGVIDPVKV VRTALQDAAS VAGLLVTTEA MIAEKPKKES TPALPAGGGM
DF
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