| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1275 |
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| Symbol | |
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| ID | 5322122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1368013 |
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| End bp | 1369179 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640790216 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001326960 |
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| Protein GI | 150396493 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0932939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.823078 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCG AAACCACGAC ATCCCCGCAA GACGATCGAA TCCCCTTGGC CGCGATGGCG
GGCATTGTCG CGACGGTTAC CGTGTTCGCA TTGGCACAGG GTCTCACCTA TCCGCTCCTC
AGCTTCATCC TGGAGCGGCA GGGCACGACC CCCGGCCTGA TCGGCTTGTC GGCGGCGATG
ACTCCGCTGG GTTTCATCAT CTCCGCGCCC TTCATTCCGG CACTGGCAGG GCGCGTGGGC
GCGGCCCGGT TCGCGACCCT GTGTTCGGCC CTGGCCGCGT CCACCCTGGT CGCGATTGCG
TGGACGCAGG AGGTCTGGGC CTGGATGCCG CTACGCTTCC TGCTCGGCTT TTTTGCCAAT
CCGCTCTACG TGATCAGCGA GACATGGCTG ATCACGATCA CGCCCGCCTC ACGCCGAGGC
CGTGTCATGG GGCTCTATTC ATCGATTGTT TCGGCTGGCT TTGCCATCGG CCCGCTTTCC
CTCGGCATGG CCGGCACCGA AGGCTGGCCG CCCTTCCTGG TGGGAATCGT CGCCTTCCTT
CTCTGCGGCC TTATCGTGCT TGCGGTCGTG CCGCGGCTGC CGAAGATGCC GCAGGAAGGC
CAGGCGACAT CGGTCGGCGG CTTCTTCGCG CTGGCGCCGC TCCTTCTGTT CGCGGTGTTC
GCTGCAGCAG CCTTCGAGCA GATCCTGCTT TCCCTGTTCG CGGTCTACGG CGCCGCTCTC
GGCAGCGCCG AGGAGCGCAT CGCCTCACTT ATAACCTGTT TTATAGCCGG CAACGCCGTG
CTGCAGATAT TGCTGGGCCA CGCGGCCGAA AAGTTCGGGT CGACGCGGAC CATGTTGTTC
TGCGCCATGG CTTCGCTGGC GGGATGCCTG CTGCTGCCCT TGATGTTCGG TTCCTGGCTC
ATCTGGCCAC TCGTGCTCGT CTGGGGCGGC GTCTCGTTCG GCATCTACAC CATGTCGCTC
ATCCAGCTCG GAGAACGGTT TACCGGGCAG GCCCTTATCG CGGGGAACGC GGCTTTCGCC
TTCGTTTGGG GTATAGGCGG CATTGCGGGC TCACCGGCGA CAGGACTGGC AATGCAACTG
ATTGGGTACC AGGGGCTGCC ATTGTCGCTC GGCCTGCTGT GCTGTGTCCT GATAGTATTG
CTGCTGGCGG ACAGATGGCG GAGCTGA
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| Protein sequence | MTAETTTSPQ DDRIPLAAMA GIVATVTVFA LAQGLTYPLL SFILERQGTT PGLIGLSAAM
TPLGFIISAP FIPALAGRVG AARFATLCSA LAASTLVAIA WTQEVWAWMP LRFLLGFFAN
PLYVISETWL ITITPASRRG RVMGLYSSIV SAGFAIGPLS LGMAGTEGWP PFLVGIVAFL
LCGLIVLAVV PRLPKMPQEG QATSVGGFFA LAPLLLFAVF AAAAFEQILL SLFAVYGAAL
GSAEERIASL ITCFIAGNAV LQILLGHAAE KFGSTRTMLF CAMASLAGCL LLPLMFGSWL
IWPLVLVWGG VSFGIYTMSL IQLGERFTGQ ALIAGNAAFA FVWGIGGIAG SPATGLAMQL
IGYQGLPLSL GLLCCVLIVL LLADRWRS
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